RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 DEFB133Q30KQ1 61 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 ZFAND6Q6FIF0 208 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 MRPL30Q8TCC3 161 aaKnown RBP3.02□□□□□ -1.93
SNHG1-205ENST00000537869 OR5P3Q8WZ94 311 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 APOBEC3DQ96AK3 386 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-205ENST00000537869 YPEL2Q96QA6 119 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 LINC00470Q9BZP3 86 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 FBXL15Q9H469 300 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 WDR54Q9H977 334 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 PROK2Q9HC23 129 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-205ENST00000537869 TMEM106BQ9NUM4 274 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF586Q9NXT0 402 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 FUT9Q9Y231 359 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 TRAPPC1Q9Y5R8 145 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 ICOSQ9Y6W8 199 aa3.02□□□□□ -1.93
SNHG1-205ENST00000537869 DMXL2Q8TDJ6 3036 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 NBEAQ8NFP9 2946 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 PLCE1Q9P212 2302 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 H3BQ85 93 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 IGKV1-5P01602 117 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 OR4A8P0C604 315 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF25P17030 456 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-205ENST00000537869 CNTFRP26992 372 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 SSX7Q7RTT5 188 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 AAED1Q7RTV5 226 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 Q8IYB0 196 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 TSTD1Q8NFU3 115 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 OR10P1Q8NGE3 313 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 NEK7Q8TDX7 302 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 PSMF1Q92530 271 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 TMEM208Q9BTX3 173 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 MPC1Q9Y5U8 109 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 ARL2-SNX15V9GYD0 113 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 PRRC2CQ9Y520 2896 aaKnown RBP3.01□□□□□ -1.93
SNHG1-205ENST00000537869 PLXNB1O43157 2135 aa3.01□□□□□ -1.93
SNHG1-205ENST00000537869 IGF2RP11717 2491 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 CADP27708 2225 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IGHV1-45A0A0A0MS14 117 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IGHV3-21A0A0B4J1V1 117 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 TRAV8-2A0A0B4J237 113 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 MDFIC2A0A1B0GVS7 189 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 C20orf202A1L168 122 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF705FA8MVS1 300 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 A8MWP4 228 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 C9JCJ5 164 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 C8orf87E5RJ46 101 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 TCF21O43680 179 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IGKV1D-33P01593 117 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IGKV1-33P01594 117 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 MT-ND6P03923 174 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 OR10J4P0C629 311 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF705DP0CH99 300 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF705BP0CI00 300 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 CGB3P0DN86 165 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 CGB7P0DN87 165 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IAPPP10997 89 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 NPPCP23582 126 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 BRS3P32247 399 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 CDC34P49427 236 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 KLF3P57682 345 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 GNG3P63215 75 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 SPANXN5Q5MJ07 72 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 FAM162BQ5T6X4 162 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 TOMM20LQ6UXN7 152 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ZNF705AQ6ZN79 300 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 SLC25A45Q8N413 288 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 LINC00304Q8N9R0 145 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 OR4B1Q8NGF8 309 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 OR2D3Q8NGH3 330 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 OR51H1Q8NH63 302 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 CMTM2Q8TAZ6 248 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 SFRP2Q96HF1 295 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 GNB1LQ9BYB4 327 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 OR2J1Q9GZK6 312 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 IL36BQ9NZH7 164 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ZFP30Q9Y2G7 519 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 TBL2Q9Y4P3 447 aaKnown RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 KMT2BQ9UMN6 2715 aaPredicted RBP3□□□□□ -1.93
SNHG1-205ENST00000537869 ABCA1O95477 2261 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ASPMQ8IZT6 3477 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 ITPR1Q14643 2758 aa3□□□□□ -1.93
SNHG1-205ENST00000537869 LAMA5O15230 3695 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 ANKRD11Q6UB99 2663 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-205ENST00000537869 TRGV10A0A0A0MS01 117 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 IGHV3-15A0A0B4J1V0 119 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 UBE2L5PA0A1B0GUS4 154 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 FNDC10F2Z333 226 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 MT-CO2P00403 227 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 GPX1P07203 203 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 CCL3P10147 92 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 G0S2P27469 103 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 RPS20P60866 119 aaKnown RBP2.99□□□□□ -1.93
SNHG1-205ENST00000537869 CATR1Q13166 79 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 FAM78BQ5VT40 261 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 RASL11AQ6T310 242 aa2.99□□□□□ -1.93
SNHG1-205ENST00000537869 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms