RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 KRASP01116 189 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 IGKV1-17P01599 117 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 GADD45AP24522 165 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 G6PCP35575 357 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 RPS20P60866 119 aaKnown RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SNRPD3P62318 126 aaKnown RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SURF2Q15527 256 aaPredicted RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 MSMO1Q15800 293 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 ATP6V1FQ16864 119 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 BSXQ3C1V8 233 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SPINK9Q5DT21 86 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 AADACL3Q5VUY0 350 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 CNIH2Q6PI25 160 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 OR4B1Q8NGF8 309 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 OR1S1Q8NH92 325 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 DEFB104AQ8WTQ1 72 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 FCGR1BQ92637 280 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SMIM8Q96KF7 97 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 TMEM56Q96MV1 263 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 C7orf50Q9BRJ6 194 aaKnown RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SNHG12Q9BXW3 62 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 SCN3BQ9NY72 215 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 EHFQ9NZC4 300 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 ANXA10Q9UJ72 324 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 MRPS16Q9Y3D3 137 aaKnown RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 TMEM56-RWDD3S4R434 201 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 V9GYH0 126 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 TRAV26-1A0A087WT03 109 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 A0A0J9YY99 117 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 FBLL1A6NHQ2 334 aaKnown RBP3.32□□□□□ -1.88
CLIP1-207ENST00000536634 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 DISC1C4P0D8 188 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 SMLR1H3BR10 107 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 PLA2G10O15496 165 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 PPYP01298 95 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 ATP5G1P05496 136 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 S100A2P29034 98 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 ATP5G3P48201 142 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 CAV2P51636 162 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 OR10A3P58181 314 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 FXYD4P59646 89 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 RPS25P62851 125 aaKnown RBP3.32□□□□□ -1.88
CLIP1-207ENST00000536634 PSG9Q00887 426 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 CATR1Q13166 79 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 ARL6IP1Q15041 203 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 PEA15Q15121 130 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 TIGITQ495A1 244 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 AHSA2Q719I0 299 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 CBLN2Q8IUK8 224 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 BAP18Q8IXM2 172 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 ZFP82Q8N141 532 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 BPIFCQ8NFQ6 507 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 TERB2Q8NHR7 220 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 TMEM70Q9BUB7 260 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 DUSP21Q9H596 190 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 GSKIPQ9P0R6 139 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 PRNDQ9UKY0 176 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 ZFP30Q9Y2G7 519 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 LSM2Q9Y333 95 aaKnown RBP3.32□□□□□ -1.88
CLIP1-207ENST00000536634 V9GY05 133 aa3.32□□□□□ -1.88
CLIP1-207ENST00000536634 A0A1B0GV72 72 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 GPR31O00270 319 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 CRXO43186 299 aaPredicted RBP3.31□□□□□ -1.88
CLIP1-207ENST00000536634 OXTP01178 125 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 MT-ND4LP03901 98 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 FGF7P21781 194 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 F2RP25116 425 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 LPAR6P43657 344 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 MRPS10P82664 201 aaKnown RBP3.31□□□□□ -1.88
CLIP1-207ENST00000536634 PRCDQ00LT1 54 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 FABP5Q01469 135 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 IL18Q14116 193 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 SCGB2B2Q4G0G5 96 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 FAM78BQ5VT40 261 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 AMTNQ6UX39 209 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 FOXI2Q6ZQN5 318 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 ZNF555Q8NEP9 628 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 OR4C16Q8NGL9 310 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 OR13C8Q8NGS7 320 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 LGALS14Q8TCE9 139 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 HIST1H2BAQ96A08 127 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 TMEM230Q96A57 120 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 GPR146Q96CH1 333 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 GNPNAT1Q96EK6 184 aaPredicted RBP3.31□□□□□ -1.88
CLIP1-207ENST00000536634 TPPP3Q9BW30 176 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 MAGT1Q9H0U3 335 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 ATG5Q9H1Y0 275 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 MED28Q9H204 178 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 SMCO4Q9NRQ5 59 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 TPRKBQ9Y3C4 175 aa3.31□□□□□ -1.88
CLIP1-207ENST00000536634 IFITM5A6NNB3 132 aa3.3□□□□□ -1.88
CLIP1-207ENST00000536634 A8MTW9 85 aa3.3□□□□□ -1.88
CLIP1-207ENST00000536634 E9PLD3 99 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms