RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 RAB2AP61019 212 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 FHL2Q14192 279 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 OR10G9Q8NGN4 311 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 OR10G7Q8NGN6 311 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 CMTM2Q8TAZ6 248 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 MED28Q9H204 178 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 RYR1P21817 5038 aa7.43□□□□□ -1.22
CCDC60-202ENST00000535685 PAX4O43316 350 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 MBP02144 154 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 GIPP09681 153 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-202ENST00000535685 CDC34P49427 236 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-202ENST00000535685 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 MRPL16Q9NX20 251 aaKnown RBP7.42□□□□□ -1.22
CCDC60-202ENST00000535685 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
CCDC60-202ENST00000535685 TRAV21A0A0B4J279 112 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 B5MCH6 92 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 ATP6V0CP27449 155 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 MRPL23Q16540 153 aaKnown RBP7.41□□□□□ -1.22
CCDC60-202ENST00000535685 MUC21Q5SSG8 566 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 GOLT1AQ6ZVE7 132 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 C5orf17Q8NAS9 161 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 TVP23CQ96ET8 276 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 HYLS1Q96M11 299 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
CCDC60-202ENST00000535685 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 FBLL1A6NHQ2 334 aaKnown RBP7.4□□□□□ -1.22
CCDC60-202ENST00000535685 M0R2P5 195 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 TMEM183BQ1AE95 376 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 ZNF575Q86XF7 245 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 TMEM183AQ8IXX5 376 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 KCNS1Q96KK3 526 aa7.4□□□□□ -1.22
CCDC60-202ENST00000535685 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 IGHV3-16A0A0C4DH30 117 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 K7EP13 123 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 SIVA1O15304 175 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 EIF3GO75821 320 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC60-202ENST00000535685 ORM1P02763 201 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 GCHFRP30047 84 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 Q5BKY6 102 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 LYPD5Q6UWN5 251 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 HSD17B11Q8NBQ5 300 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 TREM1Q9NP99 234 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 TMEM167BQ9NRX6 74 aa7.39□□□□□ -1.23
CCDC60-202ENST00000535685 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 TRGV4A0A0C4DH28 118 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 RNF222A6NCQ9 220 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 K7EQM0 130 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
CCDC60-202ENST00000535685 CIDEAO60543 219 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 CXorf1O96002 111 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 IGLV2-11P01706 119 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 IGHV3-53P01767 116 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 TCRAP04437 139 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-202ENST00000535685 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 INO80EQ8NBZ0 244 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-202ENST00000535685 PTH2Q96A98 100 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 ZNF479Q96JC4 524 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 C8orf49Q96NF6 230 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 ACTR3CQ9C0K3 210 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-202ENST00000535685 SDF2L1Q9HCN8 221 aa7.38□□□□□ -1.23
CCDC60-202ENST00000535685 HSPG2P98160 4391 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 K7EQD1 137 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 GNRH2O43555 120 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 NXPH4O95158 308 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 TYMSP04818 313 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 TIRAPP58753 221 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 GNG5P63218 68 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 EPDR1Q9UM22 224 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 RPH3ALQ9UNE2 315 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
CCDC60-202ENST00000535685 BORCS7-ASMTA0A0B4J1R7 106 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 GGTLC3B5MD39 225 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 F6UZH7 168 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 TAAR5O14804 337 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 SFTA3P0C7M3 94 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 SRIP30626 198 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 LINC00315P59091 139 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
CCDC60-202ENST00000535685 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 TMEM75Q8N9X5 138 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 OR4C5Q8NGB2 326 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
CCDC60-202ENST00000535685 SH3BGRL3Q9H299 93 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 NAGKQ9UJ70 344 aa7.36□□□□□ -1.23
CCDC60-202ENST00000535685 CTXND1A0A1B0GTU2 59 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 C9JCJ5 164 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms