RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KCNIP2Q9NS61 270 aa7.56□□□□□ -1.2
CLSTN3-206ENST00000535668 UBE2L5PA0A1B0GUS4 154 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 KRBOX1C9JBD0 128 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 J3KRW8 73 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 CCSO14618 274 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 IFNA5P01569 189 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 TPT1P13693 172 aaKnown RBP7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 GCSHP23434 173 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 BAXQ07812 192 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 RAB32Q13637 225 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 LINC01556Q5JQF7 62 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 TXNDC17Q9BRA2 123 aa7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 LSM5Q9Y4Y9 91 aaKnown RBP7.55□□□□□ -1.2
CLSTN3-206ENST00000535668 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 FGF7P21781 194 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 SRIP30626 198 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 GCSAMLQ5JQS6 135 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 Q6ZQT7 251 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 PTH2Q96A98 100 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 ZNF479Q96JC4 524 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 MRPL16Q9NX20 251 aaKnown RBP7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 MDFICQ9P1T7 246 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
CLSTN3-206ENST00000535668 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 FAM25EA8MYX2 175 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 IBA57-AS1B1ANH7 110 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 C9JCJ5 164 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 E5RGE8 158 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 TEX46H3BTG2 121 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 SIX6O95475 246 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 PAXXQ9BUH6 204 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 WDR61Q9GZS3 305 aaKnown RBP7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 SLC25A31Q9H0C2 315 aa7.53□□□□□ -1.2
CLSTN3-206ENST00000535668 DIRC3C9JPN6 131 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 GATA1P15976 413 aaPredicted RBP7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 NHLH2Q02577 135 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 LAGE3Q14657 143 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 FAM122CQ6P4D5 195 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 Q6ZSA8 131 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 MIR17HGQ75NE6 70 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 OR5C1Q8NGR4 320 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 BLNKQ8WV28 456 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 MBD2Q9UBB5 411 aa7.52□□□□□ -1.21
CLSTN3-206ENST00000535668 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 RAB19A4D1S5 217 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 M0R2P5 195 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 CRYGDP07320 174 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 GYPEP15421 78 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 CSN1S1P47710 185 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 RAB5CP51148 216 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 ZNF471Q9BX82 626 aaPredicted RBP7.51□□□□□ -1.21
CLSTN3-206ENST00000535668 BORCS7-ASMTA0A0B4J1R7 106 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 TRBV6-4A0A1B0GX49 114 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 PFN1P07737 140 aaKnown RBP7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 BLOC1S1P78537 153 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
CLSTN3-206ENST00000535668 C17orf112F2Z3M2 114 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 H0YIZ8 118 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 SFTA3P0C7M3 94 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 S100A10P60903 97 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 RANP62826 216 aaKnown RBP7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 Q8TAT8 98 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 KCNS1Q96KK3 526 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
CLSTN3-206ENST00000535668 TRAV21A0A0B4J279 112 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 SERTM2A0A1B0GWG4 89 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 KRTAP29-1A8MX34 341 aaPredicted RBP7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 OR10J4P0C629 311 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 SEC11BP0C7V7 166 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 RPL12P30050 165 aaKnown RBP7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 TAS2R45P59539 299 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 LRRC37A5PQ49AS3 106 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 PQLC2Q6ZP29 291 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 Q6ZSN1 163 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 Q8N814 137 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 OR4C5Q8NGB2 326 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 SUN5Q8TC36 379 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 SH3BGRL3Q9H299 93 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 SMDT1Q9H4I9 107 aa7.48□□□□□ -1.21
CLSTN3-206ENST00000535668 LELP1Q5T871 98 aa7.47□□□□□ -1.21
CLSTN3-206ENST00000535668 TVP23CQ96ET8 276 aa7.47□□□□□ -1.21
CLSTN3-206ENST00000535668 ATP5SQ99766 215 aa7.47□□□□□ -1.21
CLSTN3-206ENST00000535668 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 UMAD1C9J7I0 102 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 RS1O15537 224 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms