RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 ZNF418Q8TF45 676 aaPredicted RBP4.3□□□□□ -1.72
CHKA-208ENST00000533910 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 SMR3AQ99954 134 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 PYGO2Q9BRQ0 406 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 C16orf95Q9H693 158 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
CHKA-208ENST00000533910 HIVEP1P15822 2718 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 NF1P21359 2839 aa4.3□□□□□ -1.72
CHKA-208ENST00000533910 IGHV4OR15-8A0A075B7B6 117 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 A0A087WW49 117 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 TRAV8-2A0A0B4J237 113 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 IGHV7-4-1A0A0J9YVY3 117 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 A0A1W2PS18 150 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 M0R3E3 92 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 SOCS3O14543 225 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 ZNF207O43670 478 aaKnown RBP4.29□□□□□ -1.72
CHKA-208ENST00000533910 TYMSP04818 313 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 PFN1P07737 140 aaKnown RBP4.29□□□□□ -1.72
CHKA-208ENST00000533910 CXCL1P09341 107 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 RAB5AP20339 215 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 S100PP25815 95 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
CHKA-208ENST00000533910 UBE2G1P62253 170 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 FAM106AQ4KMX7 169 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 TCTEX1D4Q5JR98 221 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 GOLT1AQ6ZVE7 132 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 COX8CQ7Z4L0 72 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 BAGE2Q86Y30 109 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 TMEM183AQ8IXX5 376 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 FAM24BQ8N5W8 94 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 OR10G8Q8NGN5 311 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 CMTM2Q8TAZ6 248 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 C4orf3Q8WVX3 66 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 RPL36ALQ969Q0 106 aaKnown RBP4.29□□□□□ -1.72
CHKA-208ENST00000533910 CSTL1Q9H114 145 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 ZNF492Q9P255 531 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 UFC1Q9Y3C8 167 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 V9GYV3 84 aa4.29□□□□□ -1.72
CHKA-208ENST00000533910 SETXQ7Z333 2677 aaKnown RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 IGHV3-49A0A0A0MS15 119 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 TGIF2-C20orf24A0A0A6YYL0 155 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 IGHV3-74A0A0B4J1X5 117 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 TCAPO15273 167 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 CSN1S1P47710 185 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 RPL19P84098 196 aaKnown RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 OR5I1Q13606 314 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 RPEL1Q2QD12 228 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 OR5B12Q96R08 314 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 Q9H8V8 135 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 NRN1Q9NPD7 142 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 MLXQ9UH92 298 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 PSG8Q9UQ74 426 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 ZFP30Q9Y2G7 519 aa4.28□□□□□ -1.72
CHKA-208ENST00000533910 FLNBO75369 2602 aaKnown RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 FN1P02751 2386 aaKnown RBP4.28□□□□□ -1.72
CHKA-208ENST00000533910 IGKV2-40A0A087WW87 121 aaPredicted RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 RBAKDNA6NC62 111 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 C19orf71A6NCJ1 209 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 LINC00587B1AMM8 73 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 IGKV2D-40P01614 121 aaPredicted RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 CRYBA1P05813 215 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 MGST1P10620 155 aaKnown RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 HLA-DMBP28068 263 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 ERVFC1-1P60608 527 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 KLF5Q13887 457 aaPredicted RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 SAMD13Q5VXD3 122 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 LCN12Q6JVE5 192 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 C18orf65Q6ZTR6 163 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 LINC01006Q8NI28 216 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 RHPN1-AS1Q9BWJ2 59 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
CHKA-208ENST00000533910 IL36BQ9NZH7 164 aa4.27□□□□□ -1.73
CHKA-208ENST00000533910 CUBNO60494 3623 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 C2orf70A6NJV1 201 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 PRAC2D3DTV9 90 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 LINC01619G3V211 115 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 PHOX2AO14813 284 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 SYNJ2BPP57105 145 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 DEFB136Q30KP8 78 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 LINC00322Q6ZN03 302 aaPredicted RBP4.26□□□□□ -1.73
CHKA-208ENST00000533910 LINC00336Q6ZUF6 198 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 Q75L30 129 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 PRNTQ86SH4 94 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 GBGT1Q8N5D6 347 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
CHKA-208ENST00000533910 KLHL30-AS1Q8NEE0 82 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms