RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C5orf17Q8NAS9 161 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 TVP23CQ96ET8 276 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 SPXQ9BT56 116 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 KRTAP1-5Q9BYS1 174 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 PRO0255Q9UI72 69 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.26
CAPN1-225ENST00000533704 RNF222A6NCQ9 220 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 K7EQM0 130 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 CXorf1O96002 111 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 TCRAP04437 139 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 CRYBA4P53673 196 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 RAB14P61106 215 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 SUMO1P63165 101 aaKnown RBP7.2□□□□□ -1.26
CAPN1-225ENST00000533704 FHL2Q14192 279 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 COMMD7Q86VX2 200 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 ZNF479Q96JC4 524 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 SDF2L1Q9HCN8 221 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 TMEM167BQ9NRX6 74 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 TNFSF18Q9UNG2 199 aa7.2□□□□□ -1.26
CAPN1-225ENST00000533704 PKD1P98161 4303 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 TYMSP04818 313 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 SLAQ13239 276 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 MRPL23Q16540 153 aaKnown RBP7.19□□□□□ -1.26
CAPN1-225ENST00000533704 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 OR4C5Q8NGB2 326 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 PCNPQ8WW12 178 aaKnown RBP7.19□□□□□ -1.26
CAPN1-225ENST00000533704 PSG8Q9UQ74 426 aa7.19□□□□□ -1.26
CAPN1-225ENST00000533704 SERTM2A0A1B0GWG4 89 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 C16orf90A8MZG2 172 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 GGTLC3B5MD39 225 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 C9JCJ5 164 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 M0R2P5 195 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 SIVA1O15304 175 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 ARPC5O15511 151 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 NXPH4O95158 308 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 GCGP01275 180 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 MED14OSP0DP75 135 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 GYPEP15421 78 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 SRIP30626 198 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 FGF8P55075 233 aaPredicted RBP7.18□□□□□ -1.26
CAPN1-225ENST00000533704 UBE2G2P60604 165 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 CTAG1AP78358 180 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 TDRG1Q3Y452 100 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 CLLU1Q5K131 121 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
CAPN1-225ENST00000533704 RASL10AQ92737 203 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 KCNS1Q96KK3 526 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 EPDR1Q9UM22 224 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
CAPN1-225ENST00000533704 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 TRAV4A0A0B4J268 109 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 TRAV34A0A0B4J273 112 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 CTXND1A0A1B0GTU2 59 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 SMLR1H3BR10 107 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 ZNF80P51504 273 aaPredicted RBP7.17□□□□□ -1.26
CAPN1-225ENST00000533704 FLI1Q01543 452 aaPredicted RBP7.17□□□□□ -1.26
CAPN1-225ENST00000533704 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 NEGR1Q7Z3B1 354 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 CYB561D1Q8N8Q1 229 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 TMEM75Q8N9X5 138 aa7.17□□□□□ -1.26
CAPN1-225ENST00000533704 DNAH11Q96DT5 4516 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 A0A1W2PPQ1 181 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 K7EQD1 137 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 TAAR5O14804 337 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 LINC00315P59091 139 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 NHLRC2Q8NBF2 726 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 C11orf21Q9P2W6 132 aa7.16□□□□□ -1.26
CAPN1-225ENST00000533704 LOC100131303A0A0U1RQF7 123 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 A0A1W2PRE2 83 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 G3V3Q6 166 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 ORM1P02763 201 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 PPT1P50897 306 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 TXNDC17Q9BRA2 123 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
CAPN1-225ENST00000533704 IGHV3-73A0A0B4J1V6 119 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 MAP1LC3B2A6NCE7 125 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 FBLL1A6NHQ2 334 aaKnown RBP7.14□□□□□ -1.27
CAPN1-225ENST00000533704 PEX7O00628 323 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 PFN1P07737 140 aaKnown RBP7.14□□□□□ -1.27
CAPN1-225ENST00000533704 SAPCD1Q5SSQ6 148 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 MAP1LC3BQ9GZQ8 125 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 CYTL1Q9NRR1 136 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 HERC2O95714 4834 aa7.14□□□□□ -1.27
CAPN1-225ENST00000533704 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
CAPN1-225ENST00000533704 FAM74A7A6NL05 159 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms