RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	PAX4	O43316	350 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	CRYBA4	P53673	196 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	SUMO1	P63165	101 aa	Known RBP	12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	SLA	Q13239	276 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	IQCF2	Q8IXL9	164 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	C6orf223	Q8N319	242 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	CYB561D1	Q8N8Q1	229 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	NDFIP1	Q9BT67	221 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	EPDR1	Q9UM22	224 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	PSG8	Q9UQ74	426 aa		12.2	□□□□□ -0.46
BBS1-223	ENST00000533644	GNRH2	O43555	120 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	TYMS	P04818	313 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	TMEM75	Q8N9X5	138 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	KCNS1	Q96KK3	526 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	C8orf49	Q96NF6	230 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	KRTAP1-5	Q9BYS1	174 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	HHLA3	Q9XRX5	114 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	ICOS	Q9Y6W8	199 aa		12.19	□□□□□ -0.46
BBS1-223	ENST00000533644	FBLL1	A6NHQ2	334 aa	Known RBP	12.18	□□□□□ -0.46
BBS1-223	ENST00000533644	ZNF80	P51504	273 aa	Predicted RBP	12.18	□□□□□ -0.46
BBS1-223	ENST00000533644	FLI1	Q01543	452 aa	Predicted RBP	12.18	□□□□□ -0.46
BBS1-223	ENST00000533644	TTC32	Q5I0X7	151 aa		12.18	□□□□□ -0.46
BBS1-223	ENST00000533644	ZNF479	Q96JC4	524 aa		12.18	□□□□□ -0.46
BBS1-223	ENST00000533644	SDF2L1	Q9HCN8	221 aa		12.18	□□□□□ -0.46
BBS1-223	ENST00000533644		A0A1W2PPQ1	181 aa		12.17	□□□□□ -0.46
BBS1-223	ENST00000533644	SMLR1	H3BR10	107 aa		12.17	□□□□□ -0.46
BBS1-223	ENST00000533644		M0R2P5	195 aa		12.17	□□□□□ -0.46
BBS1-223	ENST00000533644	AKR1C8P	Q5T2L2	129 aa		12.17	□□□□□ -0.46
BBS1-223	ENST00000533644	C11orf21	Q9P2W6	132 aa		12.17	□□□□□ -0.46
BBS1-223	ENST00000533644	TRAV4	A0A0B4J268	109 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	TRGV4	A0A0C4DH28	118 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	GCG	P01275	180 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	PFN1	P07737	140 aa	Known RBP	12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	SFTA3	P0C7M3	94 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	TNP2	Q05952	138 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	ZNF345	Q14585	488 aa		12.16	□□□□□ -0.46
BBS1-223	ENST00000533644	FGF8	P55075	233 aa	Predicted RBP	12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	MRPL23	Q16540	153 aa	Known RBP	12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	ZFP69	Q49AA0	526 aa		12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	SMUG1	Q53HV7	270 aa		12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	SAPCD1	Q5SSQ6	148 aa		12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	PRNT	Q86SH4	94 aa		12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	KCNRG	Q8N5I3	272 aa		12.15	□□□□□ -0.46
BBS1-223	ENST00000533644	MAP1LC3B2	A6NCE7	125 aa		12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	FAM74A7	A6NL05	159 aa		12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	BTF3	P20290	206 aa	Known RBP	12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	UBE2G2	P60604	165 aa		12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	LINC00479	Q96M42	142 aa		12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	NKX6-2	Q9C056	277 aa	Predicted RBP	12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	MAP1LC3B	Q9GZQ8	125 aa		12.14	□□□□□ -0.47
BBS1-223	ENST00000533644	PEX7	O00628	323 aa		12.13	□□□□□ -0.47
BBS1-223	ENST00000533644	OR4C5	Q8NGB2	326 aa		12.13	□□□□□ -0.47
BBS1-223	ENST00000533644	OR11H4	Q8NGC9	324 aa		12.13	□□□□□ -0.47
BBS1-223	ENST00000533644	TRAV34	A0A0B4J273	112 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	HMSD	A8MTL9	139 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644		K7EQD1	137 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	NXPH4	O95158	308 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	IFNA7	P01567	189 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	ORM1	P02763	201 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	LYPD5	Q6UWN5	251 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	NEGR1	Q7Z3B1	354 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644		Q86TA4	180 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	HIST1H2BA	Q96A08	127 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	C9orf85	Q96MD7	179 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	ARL2-SNX15	V9GYD0	113 aa		12.12	□□□□□ -0.47
BBS1-223	ENST00000533644	SIVA1	O15304	175 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	MED14OS	P0DP75	135 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	GYPE	P15421	78 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	SRI	P30626	198 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	PPT1	P50897	306 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	PTH2	Q96A98	100 aa		12.11	□□□□□ -0.47
BBS1-223	ENST00000533644	FHIT	P49789	147 aa		12.1	□□□□□ -0.47
BBS1-223	ENST00000533644	PCNP	Q8WW12	178 aa	Known RBP	12.1	□□□□□ -0.47
BBS1-223	ENST00000533644		A0A0D9SG52	128 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644		C9JCJ5	164 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	SEC11B	P0C7V7	166 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	RNASE3	P12724	160 aa	Known RBP	12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	GATA1	P15976	413 aa	Predicted RBP	12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	ZNF876P	Q49A33	203 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	COX8C	Q7Z4L0	72 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	ZNF575	Q86XF7	245 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	STOML3	Q8TAV4	291 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	TCEAL7	Q9BRU2	100 aa		12.09	□□□□□ -0.47
BBS1-223	ENST00000533644	IGKV3D-20	A0A0C4DH25	116 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	UMAD1	C9J7I0	102 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	RS1	O15537	224 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	BCL2L11	O43521	198 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	CFAP126	Q5VTH2	177 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	DPPA3	Q6W0C5	159 aa		12.08	□□□□□ -0.48
BBS1-223	ENST00000533644	FABP5P3	A8MUU1	101 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	CIDEA	O60543	219 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	LINC00315	P59091	139 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	ZNF506	Q5JVG8	444 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	MBD3L1	Q8WWY6	194 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	TXNDC17	Q9BRA2	123 aa		12.07	□□□□□ -0.48
BBS1-223	ENST00000533644	TRBV6-1	A0A0K0K1D8	114 aa		12.06	□□□□□ -0.48
BBS1-223	ENST00000533644	LOC100131303	A0A0U1RQF7	123 aa		12.06	□□□□□ -0.48
BBS1-223	ENST00000533644	KANTR	A0A1W2PQU2	76 aa		12.06	□□□□□ -0.48
BBS1-223	ENST00000533644	PGPEP1L	A6NFU8	196 aa		12.06	□□□□□ -0.48
BBS1-223	ENST00000533644		Q6ZRN7	208 aa	Predicted RBP	12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms