RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
COPB1-208ENST00000532088 NDUFA5Q16718 116 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 TDRG1Q3Y452 100 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 FAM162BQ5T6X4 162 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 ZC2HC1AQ96GY0 325 aa9.06□□□□□ -0.96
COPB1-208ENST00000532088 J3KRW8 73 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 MIFP14174 115 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
COPB1-208ENST00000532088 CEBPGP53567 150 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 KCNS1Q96KK3 526 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 LINC01587Q99440 93 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 TMEM208Q9BTX3 173 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 NAT8Q9UHE5 227 aa9.05□□□□□ -0.96
COPB1-208ENST00000532088 HUWE1Q7Z6Z7 4374 aaKnown RBP9.04□□□□□ -0.96
COPB1-208ENST00000532088 IGHV1OR15-1A0A075B7D0 117 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 CRIP1P50238 77 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 LINC01551Q86U37 167 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 OCC1Q8TAD7 63 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
COPB1-208ENST00000532088 PRKDCP78527 4128 aaKnown RBP9.03□□□□□ -0.96
COPB1-208ENST00000532088 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 C19orf71A6NCJ1 209 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 SH2D1AO60880 128 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 CXCL1P09341 107 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
COPB1-208ENST00000532088 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
COPB1-208ENST00000532088 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 IBA57Q5T440 356 aaKnown RBP9.03□□□□□ -0.96
COPB1-208ENST00000532088 FAM231DQ6ZW35 169 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
COPB1-208ENST00000532088 SEC11CQ9BY50 192 aa9.03□□□□□ -0.96
COPB1-208ENST00000532088 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 K7EN84 100 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 Q8NAQ8 132 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 RNASE8Q8TDE3 154 aaKnown RBP9.02□□□□□ -0.97
COPB1-208ENST00000532088 DAZAP1Q96EP5 407 aaKnown RBP9.02□□□□□ -0.97
COPB1-208ENST00000532088 C16orf74Q96GX8 76 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
COPB1-208ENST00000532088 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
COPB1-208ENST00000532088 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
COPB1-208ENST00000532088 PGPEP1LA6NFU8 196 aa9.01□□□□□ -0.97
COPB1-208ENST00000532088 RPS20P60866 119 aaKnown RBP9.01□□□□□ -0.97
COPB1-208ENST00000532088 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
COPB1-208ENST00000532088 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
COPB1-208ENST00000532088 PRR27Q6MZM9 219 aa9.01□□□□□ -0.97
COPB1-208ENST00000532088 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
COPB1-208ENST00000532088 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
COPB1-208ENST00000532088 CBY3A6NI87 242 aa9□□□□□ -0.97
COPB1-208ENST00000532088 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
COPB1-208ENST00000532088 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
COPB1-208ENST00000532088 P01737 135 aa9□□□□□ -0.97
COPB1-208ENST00000532088 Q6ZQT7 251 aa9□□□□□ -0.97
COPB1-208ENST00000532088 ISOC2Q96AB3 205 aa9□□□□□ -0.97
COPB1-208ENST00000532088 RETNQ9HD89 108 aa9□□□□□ -0.97
COPB1-208ENST00000532088 OSTCQ9NRP0 149 aa9□□□□□ -0.97
COPB1-208ENST00000532088 C11orf21Q9P2W6 132 aa9□□□□□ -0.97
COPB1-208ENST00000532088 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 XKRY2A2RUG3 117 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 B4DEV8 164 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 F8W036 122 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 ORM1P02763 201 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 TYMSP04818 313 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 ADCYAP1P18509 176 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 ZNF415Q09FC8 603 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
COPB1-208ENST00000532088 OR5I1Q13606 314 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 KRTAP19-4Q3LI73 84 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 CT83Q5H943 113 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 MUC21Q5SSG8 566 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 NUDT10Q8NFP7 164 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 NUDT11Q96G61 164 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 NAGKQ9UJ70 344 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 CARHSP1Q9Y2V2 147 aaKnown RBP8.99□□□□□ -0.97
COPB1-208ENST00000532088 FBN3Q75N90 2809 aa8.99□□□□□ -0.97
COPB1-208ENST00000532088 IGHV3-16A0A0C4DH30 117 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 PLAC8L1A1L4L8 177 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 AZU1P20160 251 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 TCL1AP56279 114 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 ADIRFQ15847 76 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 C15orf54Q8N8G6 183 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 SPXQ9BT56 116 aa8.98□□□□□ -0.97
COPB1-208ENST00000532088 LYRM9A8MSI8 78 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 HTN1P15515 57 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 ASIPP42127 132 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms