RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CXorf65A6NEN9 183 aa10.37□□□□□ -0.75
CPSF1-206ENST00000531480 DEFB4AO15263 64 aa10.37□□□□□ -0.75
CPSF1-206ENST00000531480 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
CPSF1-206ENST00000531480 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
CPSF1-206ENST00000531480 LINC01587Q99440 93 aa10.37□□□□□ -0.75
CPSF1-206ENST00000531480 ZNF705GA8MUZ8 300 aaPredicted RBP10.36□□□□□ -0.75
CPSF1-206ENST00000531480 J3KRW8 73 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 PRM2P04554 102 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 AZU1P20160 251 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 S100PP25815 95 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 RNASE4P34096 147 aaKnown RBP10.36□□□□□ -0.75
CPSF1-206ENST00000531480 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 Q6ZQT7 251 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 TMEM183AQ8IXX5 376 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 TMEM263Q8WUH6 116 aaKnown RBP10.36□□□□□ -0.75
CPSF1-206ENST00000531480 SGK494Q96LW2 274 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 RPS10P5Q9NQ39 176 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
CPSF1-206ENST00000531480 DYNC2H1Q8NCM8 4307 aaKnown RBP10.36□□□□□ -0.75
CPSF1-206ENST00000531480 TRAV34A0A0B4J273 112 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 LTAP01374 205 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 MGST1P10620 155 aaKnown RBP10.35□□□□□ -0.75
CPSF1-206ENST00000531480 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 TDRG1Q3Y452 100 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 Q86TA4 180 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 LINC01551Q86U37 167 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 C16orf74Q96GX8 76 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
CPSF1-206ENST00000531480 C7orf77A4D0Y5 90 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
CPSF1-206ENST00000531480 SMUG1Q53HV7 270 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 KCNIP4Q6PIL6 250 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 C8orf49Q96NF6 230 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
CPSF1-206ENST00000531480 IGHV1OR15-1A0A075B7D0 117 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 TEX48A0A1B0GUV7 120 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 GCGP01275 180 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
CPSF1-206ENST00000531480 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 LYRM9A8MSI8 78 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
CPSF1-206ENST00000531480 SPART-AS1P0CW21 52 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
CPSF1-206ENST00000531480 C12orf74Q32Q52 190 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 IBA57Q5T440 356 aaKnown RBP10.32□□□□□ -0.76
CPSF1-206ENST00000531480 FAM231DQ6ZW35 169 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 ISOC2Q96AB3 205 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
CPSF1-206ENST00000531480 P01737 135 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
CPSF1-206ENST00000531480 RPS20P60866 119 aaKnown RBP10.31□□□□□ -0.76
CPSF1-206ENST00000531480 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
CPSF1-206ENST00000531480 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 FAM162BQ5T6X4 162 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 FAM222AQ5U5X8 452 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 TIMM8BQ9Y5J9 83 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-206ENST00000531480 RYR2Q92736 4967 aa10.31□□□□□ -0.76
CPSF1-206ENST00000531480 FABP5P3A8MUU1 101 aa10.3□□□□□ -0.76
CPSF1-206ENST00000531480 SACSQ9NZJ4 4579 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 TRAV9-1A0A075B6T8 112 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 A8MWL6 223 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
CPSF1-206ENST00000531480 HTN1P15515 57 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 CRIP1P50238 77 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 EMP1P54849 157 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 TCL1AP56279 114 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 RNF212Q495C1 297 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 CT83Q5H943 113 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 ZC2HC1AQ96GY0 325 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
CPSF1-206ENST00000531480 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
CPSF1-206ENST00000531480 CBY3A6NI87 242 aa10.28□□□□□ -0.76
CPSF1-206ENST00000531480 FAM159AQ6UWV7 190 aa10.28□□□□□ -0.76
CPSF1-206ENST00000531480 Q6ZTC4 211 aa10.28□□□□□ -0.76
CPSF1-206ENST00000531480 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
CPSF1-206ENST00000531480 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 NUPR2A6NF83 97 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 MUC21Q5SSG8 566 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 CEMP1Q6PRD7 247 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-206ENST00000531480 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-206ENST00000531480 BORCS7Q96B45 105 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
CPSF1-206ENST00000531480 GSN-AS1Q9NRJ2 163 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms