RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 THADAQ6YHU6 1953 aa11.52□□□□□ -0.57
LRRK1-207ENST00000531270 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
LRRK1-207ENST00000531270 IGLC1P0CG04 106 aa11.51□□□□□ -0.57
LRRK1-207ENST00000531270 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
LRRK1-207ENST00000531270 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
LRRK1-207ENST00000531270 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
LRRK1-207ENST00000531270 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
LRRK1-207ENST00000531270 DAND5Q8N907 189 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 C16orf74Q96GX8 76 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 HERV-K104P63124 156 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 PROP1O75360 226 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 COL11A2P13942 1736 aaPredicted RBP11.5□□□□□ -0.57
LRRK1-207ENST00000531270 ACYP1P07311 99 aa11.5□□□□□ -0.57
LRRK1-207ENST00000531270 PARP14Q460N5 1801 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 SCN4AP35499 1836 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 WFDC11Q8NEX6 87 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 UBR3Q6ZT12 1888 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 CADP27708 2225 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 ETV2O00321 342 aaPredicted RBP11.49□□□□□ -0.57
LRRK1-207ENST00000531270 CCL25O15444 150 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 SPANXDQ9BXN6 97 aa11.49□□□□□ -0.57
LRRK1-207ENST00000531270 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
LRRK1-207ENST00000531270 B5MCH6 92 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 K7EMI3 77 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 PSMB8P28062 276 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 K7EM74 188 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 RNF138Q8WVD3 245 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
LRRK1-207ENST00000531270 PI4KAP42356 2102 aa11.48□□□□□ -0.57
LRRK1-207ENST00000531270 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 A0A087WW49 117 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 FAM231DQ6ZW35 169 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 PRSS33Q8NF86 280 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 ADAMTS7Q9UKP4 1686 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 KIF26BQ2KJY2 2108 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 POLEQ07864 2286 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 IGHV2-5P01817 119 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 PCP2Q8IVA1 136 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 DEFB113Q30KQ7 82 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 IGLC7A0M8Q6 106 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 LTAP01374 205 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 IGKV4-1P06312 121 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
LRRK1-207ENST00000531270 MUSTN1Q8IVN3 82 aa11.46□□□□□ -0.57
LRRK1-207ENST00000531270 NCOR1O75376 2440 aa11.46□□□□□ -0.57
LRRK1-207ENST00000531270 C15orf65H3BRN8 121 aa11.46□□□□□ -0.58
LRRK1-207ENST00000531270 FREM3P0C091 2139 aa11.46□□□□□ -0.58
LRRK1-207ENST00000531270 NDUFA1O15239 70 aa11.46□□□□□ -0.58
LRRK1-207ENST00000531270 NRGNQ92686 78 aa11.46□□□□□ -0.58
LRRK1-207ENST00000531270 TRIOBPQ9H2D6 2365 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 LRRC37AA6NMS7 1700 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 H3BUA1 57 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 SBF2Q86WG5 1849 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
LRRK1-207ENST00000531270 GPHB5Q86YW7 130 aa11.45□□□□□ -0.58
LRRK1-207ENST00000531270 CACNA1EQ15878 2313 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRSS47A8MTI9 375 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRR20EP86478 221 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRR20CP86479 221 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRR20DP86480 221 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRR20BP86481 221 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PRR20AP86496 221 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 COL5A3P25940 1745 aaPredicted RBP11.44□□□□□ -0.58
LRRK1-207ENST00000531270 HHLA3Q9XRX5 114 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 PSME4Q14997 1843 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 A0A0J9YXV3 536 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 K7EN84 100 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 Q6ZVH6 145 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 AJUBAQ96IF1 538 aa11.44□□□□□ -0.58
LRRK1-207ENST00000531270 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 NDUFC2O95298 119 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 DOCK9Q9BZ29 2069 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 BLCAPP62952 87 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 GTSF1Q8WW33 167 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 C11orf52Q96A22 123 aa11.43□□□□□ -0.58
LRRK1-207ENST00000531270 A0A096LNI7 61 aa11.42□□□□□ -0.58
LRRK1-207ENST00000531270 DAZ2Q13117 558 aaKnown RBP11.42□□□□□ -0.58
LRRK1-207ENST00000531270 IGFL3Q6UXB1 125 aa11.42□□□□□ -0.58
LRRK1-207ENST00000531270 DAZ4Q86SG3 579 aaKnown RBP11.42□□□□□ -0.58
LRRK1-207ENST00000531270 DAZ3Q9NR90 486 aaKnown RBP11.42□□□□□ -0.58
LRRK1-207ENST00000531270 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
LRRK1-207ENST00000531270 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
LRRK1-207ENST00000531270 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms