RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 C3orf85A0A1B0GTC6 90 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 M0R129 80 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 PITX3O75364 302 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 BRS3P32247 399 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 RBP2P50120 134 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 GNG4P50150 75 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 CNBPP62633 177 aaKnown RBP1.85□□□□□ -2.11
C11orf88-204ENST00000529661 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 Q8TAT8 98 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 COPS9Q8WXC6 57 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 SMIM7Q9BQ49 75 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 BOKQ9UMX3 212 aaPredicted RBP1.85□□□□□ -2.11
C11orf88-204ENST00000529661 MYOM2P54296 1465 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 PTPRDP23468 1912 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 MCM3APO60318 1980 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 CASZ1Q86V15 1759 aa1.85□□□□□ -2.11
C11orf88-204ENST00000529661 MYO18AQ92614 2054 aaKnown RBP1.84□□□□□ -2.11
C11orf88-204ENST00000529661 PXDNLA1KZ92 1463 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 CFTRP13569 1480 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 TRAV14DV4A0A0A6YYC5 116 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 C20orf202A1L168 122 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 EDF1O60869 148 aaKnown RBP1.84□□□□□ -2.11
C11orf88-204ENST00000529661 FOXI2Q6ZQN5 318 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.11
C11orf88-204ENST00000529661 OTOGLQ3ZCN5 2332 aa1.84□□□□□ -2.12
C11orf88-204ENST00000529661 TNRC6AQ8NDV7 1962 aaKnown RBP1.83□□□□□ -2.12
C11orf88-204ENST00000529661 CR1P17927 2039 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 SPAARA0A1B0GVQ0 90 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 PCNX2A6NKB5 2137 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 HIST1H1DP16402 221 aaKnown RBP1.83□□□□□ -2.12
C11orf88-204ENST00000529661 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 OR10AG1Q8NH19 301 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 SPANXDQ9BXN6 97 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 NAA60Q9H7X0 242 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 NOP16Q9Y3C1 178 aaKnown RBP1.83□□□□□ -2.12
C11orf88-204ENST00000529661 GBF1Q92538 1859 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 DOCK10Q96BY6 2186 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 COL5A3P25940 1745 aaPredicted RBP1.83□□□□□ -2.12
C11orf88-204ENST00000529661 CNTLNQ9NXG0 1405 aa1.83□□□□□ -2.12
C11orf88-204ENST00000529661 LAMB1P07942 1786 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 ARFGEF3Q5TH69 2177 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
C11orf88-204ENST00000529661 MAPKBP1O60336 1514 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 TRAV2A0A0B4J234 112 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 LOC107984156A0A0G2JMH3 177 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 CCDC179H3BU77 68 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 J3QLW9 94 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 TNFP01375 233 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 S100A8P05109 93 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 CD2P06729 351 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 ZCCHC23Q6ZST2 131 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 SNX29P2Q8IUI4 249 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 ARL17AQ8IVW1 177 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 PATE1Q8WXA2 126 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 AGPAT4-IT1Q9H0P7 198 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 TAS2R8Q9NYW2 309 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 ZFP30Q9Y2G7 519 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 MYOFQ9NZM1 2061 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 AKAP12Q02952 1782 aa1.82□□□□□ -2.12
C11orf88-204ENST00000529661 EXPH5Q8NEV8 1989 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 UNC13CQ8NB66 2214 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 IGHV3-33P01772 117 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 ADCYAP1P18509 176 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 PPP3R1P63098 170 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 C10orf55Q5SWW7 151 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.81□□□□□ -2.12
C11orf88-204ENST00000529661 SLC25A26Q70HW3 274 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 FP248Q71RG6 208 aaPredicted RBP1.81□□□□□ -2.12
C11orf88-204ENST00000529661 GKN2Q86XP6 184 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 LINC00052Q96N35 136 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 IER3IP1Q9Y5U9 82 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 PZPP20742 1482 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 ZFYVE16Q7Z3T8 1539 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 NRKQ7Z2Y5 1582 aa1.81□□□□□ -2.12
C11orf88-204ENST00000529661 SNAPC5O75971 98 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 RNASE3P12724 160 aaKnown RBP1.8□□□□□ -2.12
C11orf88-204ENST00000529661 COX7CP15954 63 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 TPPP2P59282 170 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 Q56UQ5 140 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 RPRMQ9NS64 109 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 ORMDL1Q9P0S3 153 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 SERP1Q9Y6X1 66 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 LRP5O75197 1615 aa1.8□□□□□ -2.12
C11orf88-204ENST00000529661 TRBV6-8A0A0A6YYG3 113 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 CCL16O15467 120 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 Q6AWC8 147 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 OR2T2Q6IF00 324 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 TEX261Q6UWH6 196 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 C5orf17Q8NAS9 161 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 DYNLRB2Q8TF09 96 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 SEC11CQ9BY50 192 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 CECR2Q9BXF3 1484 aa1.79□□□□□ -2.12
C11orf88-204ENST00000529661 MYH8P13535 1937 aa1.78□□□□□ -2.12
C11orf88-204ENST00000529661 TNRC6BQ9UPQ9 1833 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 642.9 ms