RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
USH1C-208ENST00000529563 SAPCD1Q5SSQ6 148 aa8.51□□□□□ -1.05
USH1C-208ENST00000529563 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
USH1C-208ENST00000529563 TMEM263Q8WUH6 116 aaKnown RBP8.51□□□□□ -1.05
USH1C-208ENST00000529563 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
USH1C-208ENST00000529563 PKD1P98161 4303 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 A0A0J9YY99 117 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 TAGLN2P37802 199 aaKnown RBP8.5□□□□□ -1.05
USH1C-208ENST00000529563 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 PYGO2Q9BRQ0 406 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 Q9H8V8 135 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 PSG8Q9UQ74 426 aa8.5□□□□□ -1.05
USH1C-208ENST00000529563 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 GAGE12BA1L429 117 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 GAGE7O76087 117 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
USH1C-208ENST00000529563 GAGE12FP0CL80 117 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 GAGE12GP0CL81 117 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 GAGE12IP0CL82 117 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 CRISP2P16562 243 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 BTN1A1Q13410 526 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 SMUG1Q53HV7 270 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 NAGKQ9UJ70 344 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
USH1C-208ENST00000529563 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
USH1C-208ENST00000529563 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
USH1C-208ENST00000529563 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
USH1C-208ENST00000529563 RNASE8Q8TDE3 154 aaKnown RBP8.48□□□□□ -1.05
USH1C-208ENST00000529563 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
USH1C-208ENST00000529563 KLLNB2CW77 178 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 PDE6DO43924 150 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 RAB14P61106 215 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
USH1C-208ENST00000529563 ZNF680Q8NEM1 530 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 VAX2Q9UIW0 290 aa8.47□□□□□ -1.05
USH1C-208ENST00000529563 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 GCGP01275 180 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 CCL20P78556 96 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 ZFAND2AQ8N6M9 145 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 KCNS1Q96KK3 526 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
USH1C-208ENST00000529563 ZFP30Q9Y2G7 519 aa8.46□□□□□ -1.06
USH1C-208ENST00000529563 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 TRGV2A0A075B6R0 118 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 BCL2P10415 239 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 MEF2BQ02080 365 aaPredicted RBP8.45□□□□□ -1.06
USH1C-208ENST00000529563 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 LINC00479Q96M42 142 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 MED9Q9NWA0 146 aa8.45□□□□□ -1.06
USH1C-208ENST00000529563 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
USH1C-208ENST00000529563 CEBPGP53567 150 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 TMEM183BQ1AE95 376 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 TEX261Q6UWH6 196 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 Q86TA4 180 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 BAGE2Q86Y30 109 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
USH1C-208ENST00000529563 A0A1W2PPQ1 181 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 RBFOX3A6NFN3 312 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 FABP5P3A8MUU1 101 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 EREGO14944 169 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 ZNF324O75467 553 aaPredicted RBP8.43□□□□□ -1.06
USH1C-208ENST00000529563 ORM1P02763 201 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 PFN1P07737 140 aaKnown RBP8.43□□□□□ -1.06
USH1C-208ENST00000529563 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
USH1C-208ENST00000529563 ESRGQ1W209 222 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 PRR9Q5T870 116 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 Q6AWC8 147 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
USH1C-208ENST00000529563 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
USH1C-208ENST00000529563 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
USH1C-208ENST00000529563 HOXA5P20719 270 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 GNG4P50150 75 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 FAM162BQ5T6X4 162 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 DAZAP1Q96EP5 407 aaKnown RBP8.42□□□□□ -1.06
USH1C-208ENST00000529563 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 UPK3BQ9BT76 320 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 GSN-AS1Q9NRJ2 163 aa8.42□□□□□ -1.06
USH1C-208ENST00000529563 H3BNG1 76 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 IGLV2-11P01706 119 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
USH1C-208ENST00000529563 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 TOR2AQ5JU69 321 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms