RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 GNG4P50150 75 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 CEBPGP53567 150 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
USF1-209ENST00000529476 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
USF1-209ENST00000529476 ZNF674Q2M3X9 581 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 TDRG1Q3Y452 100 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 PARLQ9H300 379 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 GSN-AS1Q9NRJ2 163 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
USF1-209ENST00000529476 LCE6AA0A183 80 aa10□□□□□ -0.81
USF1-209ENST00000529476 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
USF1-209ENST00000529476 C9JQL5 133 aa10□□□□□ -0.81
USF1-209ENST00000529476 IGLV2-8P01709 118 aa10□□□□□ -0.81
USF1-209ENST00000529476 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
USF1-209ENST00000529476 FAM162BQ5T6X4 162 aa10□□□□□ -0.81
USF1-209ENST00000529476 NOP10Q9NPE3 64 aaKnown RBP10□□□□□ -0.81
USF1-209ENST00000529476 TRGV11A0A075B6L2 103 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 SNURFLB1AK76 121 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
USF1-209ENST00000529476 TYMSP04818 313 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 PEA15Q15121 130 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 PRR27Q6MZM9 219 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 SDF2L1Q9HCN8 221 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 TIMM8BQ9Y5J9 83 aaPredicted RBP9.99□□□□□ -0.81
USF1-209ENST00000529476 HYDINQ4G0P3 5121 aa9.99□□□□□ -0.81
USF1-209ENST00000529476 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 M0R036 132 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 ORM1P02763 201 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 MGST1P10620 155 aaKnown RBP9.98□□□□□ -0.81
USF1-209ENST00000529476 TCL1AP56279 114 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 ZNF415Q09FC8 603 aa9.98□□□□□ -0.81
USF1-209ENST00000529476 IBA57Q5T440 356 aaKnown RBP9.98□□□□□ -0.81
USF1-209ENST00000529476 IGHV3-16A0A0C4DH30 117 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 C9JCJ5 164 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
USF1-209ENST00000529476 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 Q6ZTC4 211 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
USF1-209ENST00000529476 B4DEV8 164 aa9.96□□□□□ -0.82
USF1-209ENST00000529476 DAD1P61803 113 aa9.96□□□□□ -0.82
USF1-209ENST00000529476 OCC1Q8TAD7 63 aa9.96□□□□□ -0.82
USF1-209ENST00000529476 SMIM7Q9BQ49 75 aa9.96□□□□□ -0.82
USF1-209ENST00000529476 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.82
USF1-209ENST00000529476 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 ZNF727A8MUV8 499 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 KRBOX1C9JBD0 128 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 K7EN84 100 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
USF1-209ENST00000529476 OR5I1Q13606 314 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 LINC01559Q495D7 138 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 Q6ZTI0 123 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
USF1-209ENST00000529476 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
USF1-209ENST00000529476 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GAGE12BA1L429 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GRIFINA4D1Z8 144 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 SPINK4O60575 86 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GAGE7O76087 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GAGE12FP0CL80 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GAGE12GP0CL81 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 GAGE12IP0CL82 117 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 ZNF575Q86XF7 245 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
USF1-209ENST00000529476 DNAH7Q8WXX0 4024 aa9.94□□□□□ -0.82
USF1-209ENST00000529476 LYSTQ99698 3801 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
USF1-209ENST00000529476 ASIPP42127 132 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
USF1-209ENST00000529476 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 SPXQ9BT56 116 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
USF1-209ENST00000529476 MUC4Q99102 2169 aa9.92□□□□□ -0.82
USF1-209ENST00000529476 HTN3P15516 51 aa9.92□□□□□ -0.82
USF1-209ENST00000529476 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
USF1-209ENST00000529476 LGALS9BQ3B8N2 356 aa9.92□□□□□ -0.82
USF1-209ENST00000529476 LY96Q9Y6Y9 160 aa9.92□□□□□ -0.82
USF1-209ENST00000529476 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 TRAV10A0A0B4J240 114 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 H3BVH4 76 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 M0R2P5 195 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 P01737 135 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 FAM74A3Q4VXF1 159 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
USF1-209ENST00000529476 LINC01551Q86U37 167 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
USF1-209ENST00000529476 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms