RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
CTSB-215ENST00000528965 ATP6V0CP27449 155 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 Q5BKY6 102 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 ACTR3CQ9C0K3 210 aaPredicted RBP10.65□□□□□ -0.7
CTSB-215ENST00000528965 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 DNAH5Q8TE73 4624 aa10.65□□□□□ -0.7
CTSB-215ENST00000528965 GYPEP15421 78 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 TMEM183BQ1AE95 376 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 Q6ZQT7 251 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 SH2D6Q7Z4S9 175 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 TMEM183AQ8IXX5 376 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 OR2G3Q8NGZ4 309 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 RASL10AQ92737 203 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
CTSB-215ENST00000528965 A0A087WTM6 91 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 TRAV4A0A0B4J268 109 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 K7EQM0 130 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 SFTA3P0C7M3 94 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
CTSB-215ENST00000528965 RAB24Q969Q5 203 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 MDFICQ9P1T7 246 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 TNFSF18Q9UNG2 199 aa10.63□□□□□ -0.71
CTSB-215ENST00000528965 TAAR5O14804 337 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 ARPC5O15511 151 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 CXorf1O96002 111 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 AKR1C8PQ5T2L2 129 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 WFDC10BQ8IUB3 73 aa10.62□□□□□ -0.71
CTSB-215ENST00000528965 M0R2P5 195 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 TDRG1Q3Y452 100 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 FRZBQ92765 325 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 BOLA1Q9Y3E2 137 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
CTSB-215ENST00000528965 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 CRYGDP07320 174 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 GCHFRP30047 84 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 SH3BGRL3Q9H299 93 aa10.6□□□□□ -0.71
CTSB-215ENST00000528965 RNF222A6NCQ9 220 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTSB-215ENST00000528965 PPT1P50897 306 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
CTSB-215ENST00000528965 PSCAO43653 123 aa10.58□□□□□ -0.72
CTSB-215ENST00000528965 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
CTSB-215ENST00000528965 TIRAPP58753 221 aa10.58□□□□□ -0.72
CTSB-215ENST00000528965 SUMO1P63165 101 aaKnown RBP10.58□□□□□ -0.72
CTSB-215ENST00000528965 Q5VSD8 79 aa10.58□□□□□ -0.72
CTSB-215ENST00000528965 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
CTSB-215ENST00000528965 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 SERTM2A0A1B0GWG4 89 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 IFNA7P01567 189 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 GCSHP23434 173 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 XGP55808 180 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 GNG5P63218 68 aa10.57□□□□□ -0.72
CTSB-215ENST00000528965 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
CTSB-215ENST00000528965 IGHV3-38A0A0C4DH36 116 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
CTSB-215ENST00000528965 F6UZH7 168 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 ZFP69Q49AA0 526 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 STOML3Q8TAV4 291 aa10.56□□□□□ -0.72
CTSB-215ENST00000528965 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 KANTRA0A1W2PQU2 76 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 CIDEAO60543 219 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 TYMSP04818 313 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 PFN1P07737 140 aaKnown RBP10.55□□□□□ -0.72
CTSB-215ENST00000528965 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
CTSB-215ENST00000528965 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 NTN5Q8WTR8 489 aaPredicted RBP10.55□□□□□ -0.72
CTSB-215ENST00000528965 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
CTSB-215ENST00000528965 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 A0A0D9SG52 128 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 GNRH2O43555 120 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 PFDN1O60925 122 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 TCRAP04437 139 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 UBE2G2P60604 165 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 EIF5AP63241 154 aaKnown RBP10.54□□□□□ -0.72
CTSB-215ENST00000528965 RHOHQ15669 191 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
CTSB-215ENST00000528965 TRAV8-1A0A0A6YYK1 113 aa10.53□□□□□ -0.72
CTSB-215ENST00000528965 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms