RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 PAXXQ9BUH6 204 aa8.52□□□□□ -1.05
CLNS1A-207ENST00000527133 GTSF1LQ9H1H1 148 aa8.52□□□□□ -1.05
CLNS1A-207ENST00000527133 C11orf1Q9H5F2 150 aa8.52□□□□□ -1.05
CLNS1A-207ENST00000527133 IGSF23A1L1A6 192 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 NAP1L6A6NFF2 107 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 SULT1A1P50225 295 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 RANP62826 216 aaKnown RBP8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 ACOT6Q3I5F7 207 aaPredicted RBP8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 NPCDR1Q9BY65 106 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 TNXBP22105 4242 aa8.51□□□□□ -1.05
CLNS1A-207ENST00000527133 TRBV6-4A0A1B0GX49 114 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 TYMSP04818 313 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 PVALBP20472 110 aaPredicted RBP8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 S100A5P33763 92 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 HNRNPA3P51991 378 aaKnown RBP8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 HBG1P69891 147 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 HBG2P69892 147 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 TOR2AQ5JU69 321 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 STX12Q86Y82 276 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 Q8N976 141 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
CLNS1A-207ENST00000527133 GGTLC3B5MD39 225 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 OR7C2O60412 319 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 S100A10P60903 97 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 ZNF876PQ49A33 203 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 CFAP126Q5VTH2 177 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 TRIQKQ629K1 86 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 TMEM252Q8N6L7 170 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 THAP6Q8TBB0 222 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 ATP5SQ99766 215 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 SDF2L1Q9HCN8 221 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 COX11Q9Y6N1 276 aa8.49□□□□□ -1.05
CLNS1A-207ENST00000527133 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 RNF222A6NCQ9 220 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 F6UZH7 168 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 BTCP35070 178 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 ATP6V1FQ16864 119 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 DPPA3Q6W0C5 159 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 HYLS1Q96M11 299 aa8.48□□□□□ -1.05
CLNS1A-207ENST00000527133 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 CIDEAO60543 219 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 UBE2L3P68036 154 aaKnown RBP8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 SPANXN2Q5MJ10 180 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 ASB13Q8WXK3 278 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 RMI2Q96E14 147 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 DNAJC30Q96LL9 226 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
CLNS1A-207ENST00000527133 CENPXA8MT69 81 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 IGLV2-11P01706 119 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 MT1HL1P0DM35 61 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 TMED6Q8WW62 240 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 KCNS1Q96KK3 526 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 C2orf50Q96LR7 162 aa8.46□□□□□ -1.06
CLNS1A-207ENST00000527133 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 GAGE1Q13065 139 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 GAGE4Q13068 117 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 GAGE5Q13069 117 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 RAB32Q13637 225 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 SH3BGRL3Q9H299 93 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 TREM1Q9NP99 234 aa8.45□□□□□ -1.06
CLNS1A-207ENST00000527133 TRAV8-1A0A0A6YYK1 113 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 NHLH2Q02577 135 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 NMES1Q9C002 83 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 URGCP-MRPS24S4R325 110 aa8.44□□□□□ -1.06
CLNS1A-207ENST00000527133 PGPEP1LA6NFU8 196 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 ZNF506Q5JVG8 444 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 OR5C1Q8NGR4 320 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 OTORQ9NRC9 128 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
CLNS1A-207ENST00000527133 A0A087WWC5 75 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 PGPA6NDG6 321 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 CNPY1Q3B7I2 92 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 CYB561D1Q8N8Q1 229 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 C9orf85Q96MD7 179 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 C11orf21Q9P2W6 132 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 Q9UF83 564 aa8.42□□□□□ -1.06
CLNS1A-207ENST00000527133 TRAV6A0A075B6T7 132 aa8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 EIF3GO75821 320 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 IL15RAQ13261 267 aa8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 KHDC3LQ587J8 217 aa8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 NIT1Q86X76 327 aa8.41□□□□□ -1.06
CLNS1A-207ENST00000527133 OR2T35Q8NGX2 323 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms