RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.93
USH1C-203ENST00000526181 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
USH1C-203ENST00000526181 A0A1B0GVG6 124 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 TAAR5O14804 337 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 CRYBA4P53673 196 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 FLI1Q01543 452 aaPredicted RBP9.26□□□□□ -0.93
USH1C-203ENST00000526181 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 CYB561D1Q8N8Q1 229 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 OR11H4Q8NGC9 324 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 RASL10AQ92737 203 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 SPXQ9BT56 116 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 NDFIP1Q9BT67 221 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 UPK3BQ9BT76 320 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 SDF2L1Q9HCN8 221 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 ICOSQ9Y6W8 199 aa9.26□□□□□ -0.93
USH1C-203ENST00000526181 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 TRGV4A0A0C4DH28 118 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 K7EQM0 130 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 GCGP01275 180 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 TNP2Q05952 138 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 C6orf223Q8N319 242 aa9.25□□□□□ -0.93
USH1C-203ENST00000526181 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 FAM74A7A6NL05 159 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 FHITP49789 147 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 Q6ZNX1 250 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 KCNRGQ8N5I3 272 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
USH1C-203ENST00000526181 PKD1P98161 4303 aa9.23□□□□□ -0.93
USH1C-203ENST00000526181 M0R2P5 195 aa9.23□□□□□ -0.93
USH1C-203ENST00000526181 IFNA7P01567 189 aa9.23□□□□□ -0.93
USH1C-203ENST00000526181 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
USH1C-203ENST00000526181 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
USH1C-203ENST00000526181 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 C9JCJ5 164 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 PEX7O00628 323 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 ZNF345Q14585 488 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 ZFP69Q49AA0 526 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 SMUG1Q53HV7 270 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 Q86TA4 180 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 OR4C5Q8NGB2 326 aa9.22□□□□□ -0.93
USH1C-203ENST00000526181 LOC100131303A0A0U1RQF7 123 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 K7EQD1 137 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 SLAQ13239 276 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.94
USH1C-203ENST00000526181 TTC32Q5I0X7 151 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.94
USH1C-203ENST00000526181 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
USH1C-203ENST00000526181 BCL2L11O43521 198 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 NXPH4O95158 308 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 GYPEP15421 78 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 DPPA3Q6W0C5 159 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
USH1C-203ENST00000526181 DYNC1H1Q14204 4646 aaKnown RBP9.2□□□□□ -0.94
USH1C-203ENST00000526181 A0A1B0GV50 99 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 A0A1W2PPQ1 181 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 HMSDA8MTL9 139 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 SIVA1O15304 175 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
USH1C-203ENST00000526181 SRIP30626 198 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 FAM213BQ8TBF2 198 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
USH1C-203ENST00000526181 ZNF471Q9BX82 626 aaPredicted RBP9.19□□□□□ -0.94
USH1C-203ENST00000526181 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 KANTRA0A1W2PQU2 76 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 PGPEP1LA6NFU8 196 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 ORM1P02763 201 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 CRIP1P50238 77 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 PPT1P50897 306 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 CST9LP1Q5W188 147 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 PCNPQ8WW12 178 aaKnown RBP9.18□□□□□ -0.94
USH1C-203ENST00000526181 ZC2HC1AQ96GY0 325 aa9.18□□□□□ -0.94
USH1C-203ENST00000526181 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
USH1C-203ENST00000526181 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 A0A0D9SG52 128 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 RS1O15537 224 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 PAGE4O60829 102 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
USH1C-203ENST00000526181 LINC00315P59091 139 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 STOML3Q8TAV4 291 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 SFT2D1Q8WV19 159 aa9.17□□□□□ -0.94
USH1C-203ENST00000526181 FABP5P3A8MUU1 101 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 M0R036 132 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 SH2D1AO60880 128 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 UBE2G1P62253 170 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms