RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 TPT1P13693 172 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 LGALSLQ3ZCW2 172 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 PRO0255Q9UI72 69 aa12.8□□□□□ -0.36
TSPAN4-216ENST00000526055 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
TSPAN4-216ENST00000526055 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
TSPAN4-216ENST00000526055 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
TSPAN4-216ENST00000526055 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
TSPAN4-216ENST00000526055 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
TSPAN4-216ENST00000526055 A0A096LPF7 62 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 A0A1B0GVY2 172 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 F6UZH7 168 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 PAX4O43316 350 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 EIF5AL1Q6IS14 154 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 Q9H8V8 135 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-216ENST00000526055 IGHV3-16A0A0C4DH30 117 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 M0R2P5 195 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 ESRGQ1W209 222 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 TTC32Q5I0X7 151 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 SAPCD1Q5SSQ6 148 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 HHLA3Q9XRX5 114 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 ICOSQ9Y6W8 199 aa12.77□□□□□ -0.37
TSPAN4-216ENST00000526055 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
TSPAN4-216ENST00000526055 CRYBA4P53673 196 aa12.76□□□□□ -0.37
TSPAN4-216ENST00000526055 FHL2Q14192 279 aa12.76□□□□□ -0.37
TSPAN4-216ENST00000526055 SMUG1Q53HV7 270 aa12.76□□□□□ -0.37
TSPAN4-216ENST00000526055 A0A1W2PPQ1 181 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 GNRH2O43555 120 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 TYMSP04818 313 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 PKHD1P08F94 4074 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 BTF3P20290 206 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 PPT1P50897 306 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 SLC51BQ86UW2 128 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 C9orf62Q8N4C0 152 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 HIST1H2BAQ96A08 127 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
TSPAN4-216ENST00000526055 DNAH2Q9P225 4427 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 TRAV4A0A0B4J268 109 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 PRNTQ86SH4 94 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 C6orf223Q8N319 242 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 TCEAL7Q9BRU2 100 aa12.74□□□□□ -0.37
TSPAN4-216ENST00000526055 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 GCGP01275 180 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 IFNA7P01567 189 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 DNAH17Q9UFH2 4485 aa12.73□□□□□ -0.37
TSPAN4-216ENST00000526055 PEX7O00628 323 aa12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 CIDEAO60543 219 aa12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 ORM1P02763 201 aa12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 FHITP49789 147 aa12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 ZNF479Q96JC4 524 aa12.72□□□□□ -0.37
TSPAN4-216ENST00000526055 RAB5CP51148 216 aa12.71□□□□□ -0.37
TSPAN4-216ENST00000526055 FGF8P55075 233 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-216ENST00000526055 UBE2G2P60604 165 aa12.71□□□□□ -0.37
TSPAN4-216ENST00000526055 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.37
TSPAN4-216ENST00000526055 PTH2Q96A98 100 aa12.71□□□□□ -0.37
TSPAN4-216ENST00000526055 SFTA3P0C7M3 94 aa12.7□□□□□ -0.38
TSPAN4-216ENST00000526055 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
TSPAN4-216ENST00000526055 FAM213BQ8TBF2 198 aa12.7□□□□□ -0.38
TSPAN4-216ENST00000526055 PCNPQ8WW12 178 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-216ENST00000526055 C11orf21Q9P2W6 132 aa12.7□□□□□ -0.38
TSPAN4-216ENST00000526055 C9JCJ5 164 aa12.69□□□□□ -0.38
TSPAN4-216ENST00000526055 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
TSPAN4-216ENST00000526055 LINC00479Q96M42 142 aa12.69□□□□□ -0.38
TSPAN4-216ENST00000526055 C9orf85Q96MD7 179 aa12.69□□□□□ -0.38
TSPAN4-216ENST00000526055 ZFP30Q9Y2G7 519 aa12.69□□□□□ -0.38
TSPAN4-216ENST00000526055 TRAV34A0A0B4J273 112 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 K7EQD1 137 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 SRIP30626 198 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 SH2D6Q7Z4S9 175 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 Q86TA4 180 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 MBD3L1Q8WWY6 194 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 FMC1Q96HJ9 113 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 TXNDC17Q9BRA2 123 aa12.68□□□□□ -0.38
TSPAN4-216ENST00000526055 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
TSPAN4-216ENST00000526055 SIVA1O15304 175 aa12.67□□□□□ -0.38
TSPAN4-216ENST00000526055 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
TSPAN4-216ENST00000526055 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
TSPAN4-216ENST00000526055 SFT2D1Q8WV19 159 aa12.67□□□□□ -0.38
TSPAN4-216ENST00000526055 HERC2O95714 4834 aa12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 TEX46H3BTG2 121 aa12.66□□□□□ -0.38
TSPAN4-216ENST00000526055 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms