RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SLC30A7Q8NEW0 376 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 OR4C6Q8NH72 309 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 S100A13Q99584 98 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 SLC50A1Q9BRV3 221 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 PRO1933Q9H354 126 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 CST9LQ9H4G1 147 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 TPT1P8Q9HAU6 139 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 C19orf12Q9NSK7 152 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 MED9Q9NWA0 146 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 GNG8Q9UK08 70 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 HS3ST2Q9Y278 367 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 KCPQ6ZWJ8 1503 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 ANAPC1Q9H1A4 1944 aa1.89□□□□□ -2.11
CSDE1-211ENST00000525970 DDX60LQ5H9U9 1706 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 RGPD3A6NKT7 1758 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 RGPD4Q7Z3J3 1758 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 PTPRFP10586 1907 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 TRAV1-1A0A0B4J248 108 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 TMEM218A2RU14 115 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 A6NIN4 97 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 OR1I1O60431 355 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 NMBP08949 121 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 ASAH2BP0C7U1 165 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 PIPP12273 146 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 SRP9P49458 86 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 SMIM11AP58511 58 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 MRPS10P82664 201 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 RHOGP84095 191 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 HMGN3Q15651 99 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 ESRGQ1W209 222 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 NCMAPQ5T1S8 102 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 EIF5AL1Q6IS14 154 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 PRR15Q8IV56 129 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 ZNF418Q8TF45 676 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 SKA2Q8WVK7 121 aaPredicted RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 ADAT1Q9BUB4 502 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 GGACTQ9BVM4 153 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 REG4Q9BYZ8 158 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 POPDC3Q9HBV1 291 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 METTL1Q9UBP6 276 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 LAMTOR3Q9UHA4 124 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 ZFC3H1O60293 1989 aaKnown RBP1.88□□□□□ -2.11
CSDE1-211ENST00000525970 PCDH15Q96QU1 1955 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 DOT1LQ8TEK3 1739 aa1.88□□□□□ -2.11
CSDE1-211ENST00000525970 MCRIP1C9JLW8 97 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 H7BYZ3 331 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 M0R143 59 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 CCL22O00626 93 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 IGF2P01344 180 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 IFNGP01579 166 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 MT-ND4LP03901 98 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 SFTA3P0C7M3 94 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 ZNF705BP0CI00 300 aaPredicted RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 CXCL8P10145 99 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 TPT1P13693 172 aaKnown RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 FGF7P21781 194 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 AKR1C3P42330 323 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 RP1P56715 2156 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 CDK6Q00534 326 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 PLCXD2Q0VAA5 305 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 RTL8BQ17RB0 113 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 TMEM128Q5BJH2 165 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 RICTORQ6R327 1708 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 PHF5AQ7RTV0 110 aaKnown RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 COA5Q86WW8 74 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 DEFB106AQ8N104 65 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 ANKRD31Q8N7Z5 1873 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 NUP210Q8TEM1 1887 aaPredicted RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 THEM6Q8WUY1 208 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 C14orf144Q96I85 54 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 VPS25Q9BRG1 176 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 C2orf88Q9BSF0 95 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 EFCAB11Q9BUY7 163 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 ATG5Q9H1Y0 275 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 CALML5Q9NZT1 146 aa1.87□□□□□ -2.11
CSDE1-211ENST00000525970 NOP16Q9Y3C1 178 aaKnown RBP1.87□□□□□ -2.11
CSDE1-211ENST00000525970 LY75O60449 1722 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 TRAV3A0A0B4J244 114 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 TRAV5A0A0B4J249 113 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 TRDV1A0A1B0GX56 115 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 SNRPGP15A8MWD9 76 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 M0QZK8 103 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 TIMM17BO60830 172 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 UBL3O95164 117 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 PRH1P02810 166 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 CXCL1P09341 107 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 MGST1P10620 155 aaKnown RBP1.86□□□□□ -2.11
CSDE1-211ENST00000525970 FABP4P15090 132 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 SSR2P43308 183 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 S100A10P60903 97 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 SNRPGP62308 76 aaKnown RBP1.86□□□□□ -2.11
CSDE1-211ENST00000525970 PDE6HQ13956 83 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 SURF2Q15527 256 aaPredicted RBP1.86□□□□□ -2.11
CSDE1-211ENST00000525970 SMIM5Q71RC9 77 aa1.86□□□□□ -2.11
CSDE1-211ENST00000525970 FP248Q71RG6 208 aaPredicted RBP1.86□□□□□ -2.11
CSDE1-211ENST00000525970 ST6GALNAC3Q8NDV1 305 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms