RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GSN-AS1Q9NRJ2 163 aa4.63□□□□□ -1.67
CD44-214ENST00000525211 NAGKQ9UJ70 344 aa4.63□□□□□ -1.67
CD44-214ENST00000525211 TP53TG1Q9Y2A0 90 aa4.63□□□□□ -1.67
CD44-214ENST00000525211 LENEPQ9Y5L5 61 aa4.63□□□□□ -1.67
CD44-214ENST00000525211 U3KQK5 164 aa4.63□□□□□ -1.67
CD44-214ENST00000525211 TMSB15BA0A087X1C1 80 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TRBV7-9A0A0J9YWB2 115 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 C19orf71A6NCJ1 209 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TMEM250H0YL14 139 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 M0R036 132 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 PDE6DO43924 150 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 AMBPP02760 352 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TYMSP04818 313 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 GZMBP10144 247 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TSPOP30536 169 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TAS2R60P59551 318 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 NUTF2P61970 127 aaKnown RBP4.62□□□□□ -1.67
CD44-214ENST00000525211 UBE2G1P62253 170 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 SMUG1Q53HV7 270 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 PRR27Q6MZM9 219 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 COMMD7Q86VX2 200 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 TMEM183AQ8IXX5 376 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 SLC7A5P1Q8MH63 180 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 RNASE8Q8TDE3 154 aaKnown RBP4.62□□□□□ -1.67
CD44-214ENST00000525211 NEU1Q99519 415 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 GOLT1BQ9Y3E0 138 aa4.62□□□□□ -1.67
CD44-214ENST00000525211 MUC4Q99102 2169 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 PLECQ15149 4684 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 IGHV1OR15-1A0A075B7D0 117 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 IGHV3-16A0A0C4DH30 117 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 MUC21A0A0G2JKD1 596 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 MUC21A0A140T8X8 626 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 KRBOX1C9JBD0 128 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 H7BYZ3 331 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 K7EQM0 130 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 PFN1P07737 140 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 NHLRC4P0CG21 123 aaPredicted RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 MGST1P10620 155 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 RNASE3P12724 160 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 NANOS2P60321 138 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 RAB14P61106 215 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 RRN3P1Q2M238 152 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 C12orf74Q32Q52 190 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 TXNDC17Q9BRA2 123 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 LINC00467Q9BRT7 94 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 TCEAL7Q9BRU2 100 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 TMEM208Q9BTX3 173 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 C1QTNF4Q9BXJ3 329 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 RNASE7Q9H1E1 156 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 NOP10Q9NPE3 64 aaKnown RBP4.61□□□□□ -1.67
CD44-214ENST00000525211 ZFP30Q9Y2G7 519 aa4.61□□□□□ -1.67
CD44-214ENST00000525211 TRAV21A0A0B4J279 112 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 CBY3A6NI87 242 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 FABP5P3A8MUU1 101 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 ZNF727A8MUV8 499 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 C9JCJ5 164 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 MIFP14174 115 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 TAGLN2P37802 199 aaKnown RBP4.6□□□□□ -1.67
CD44-214ENST00000525211 GNG4P50150 75 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 RPL23P62829 140 aaKnown RBP4.6□□□□□ -1.67
CD44-214ENST00000525211 PEA15Q15121 130 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 TDRG1Q3Y452 100 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 SAPCD1Q5SSQ6 148 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 Q6ZTI0 123 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 LINC01551Q86U37 167 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 EIF4E3Q8N5X7 224 aaKnown RBP4.6□□□□□ -1.67
CD44-214ENST00000525211 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 SMIM7Q9BQ49 75 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 PYGO2Q9BRQ0 406 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 NIPSNAP3BQ9BS92 247 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 NDFIP1Q9BT67 221 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 JPT2Q9H910 190 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 MRPL16Q9NX20 251 aaKnown RBP4.6□□□□□ -1.67
CD44-214ENST00000525211 DKK2Q9UBU2 259 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 TIMM8BQ9Y5J9 83 aaPredicted RBP4.6□□□□□ -1.67
CD44-214ENST00000525211 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
CD44-214ENST00000525211 TMEM218A2RU14 115 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 B4DEV8 164 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 NDUFS6O75380 124 aaKnown RBP4.59□□□□□ -1.67
CD44-214ENST00000525211 ORM1P02763 201 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 S100A9P06702 114 aaKnown RBP4.59□□□□□ -1.67
CD44-214ENST00000525211 TCL1AP56279 114 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 FAM162BQ5T6X4 162 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 Q6ZTC4 211 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 TMEM256Q8N2U0 113 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 TMEM263Q8WUH6 116 aaKnown RBP4.59□□□□□ -1.67
CD44-214ENST00000525211 C9orf85Q96MD7 179 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 C20orf144Q9BQM9 153 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 C11orf68Q9H3H3 251 aaKnown RBP4.59□□□□□ -1.67
CD44-214ENST00000525211 SDF2L1Q9HCN8 221 aa4.59□□□□□ -1.67
CD44-214ENST00000525211 GAGE12BA1L429 117 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SMIM9A6NGZ8 99 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 FBLL1A6NHQ2 334 aaKnown RBP4.58□□□□□ -1.68
CD44-214ENST00000525211 H3BVH4 76 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SPINK4O60575 86 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 GAGE7O76087 117 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 ARMS2P0C7Q2 107 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 GAGE12FP0CL80 117 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms