RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 RNF222A6NCQ9 220 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 SIVA1O15304 175 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 GHRHP01286 108 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 TYMSP04818 313 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 GIPP09681 153 aaPredicted RBP6.47□□□□□ -1.37
SF3B2-204ENST00000525207 MRPL23Q16540 153 aaKnown RBP6.47□□□□□ -1.37
SF3B2-204ENST00000525207 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
SF3B2-204ENST00000525207 SUN5Q8TC36 379 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 ASB13Q8WXK3 278 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 ZNF479Q96JC4 524 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 SH3BGRL3Q9H299 93 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 TREM1Q9NP99 234 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 HHLA3Q9XRX5 114 aa6.47□□□□□ -1.37
SF3B2-204ENST00000525207 TRAV4A0A0B4J268 109 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 TRGV4A0A0C4DH28 118 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 IGHV3-16A0A0C4DH30 117 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 GGTLC3B5MD39 225 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 K7EQD1 137 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 M0R2P5 195 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 TCRAP04437 139 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 GCHFRP30047 84 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 SERF2P84101 59 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 Q5BKY6 102 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 SPATA12Q7Z6I5 190 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 IQCF2Q8IXL9 164 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 SDF2L1Q9HCN8 221 aa6.46□□□□□ -1.38
SF3B2-204ENST00000525207 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
SF3B2-204ENST00000525207 EREGO14944 169 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 MBP02144 154 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 SRIP30626 198 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 PCNPQ8WW12 178 aaKnown RBP6.45□□□□□ -1.38
SF3B2-204ENST00000525207 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 SGK494Q96LW2 274 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
SF3B2-204ENST00000525207 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 FXYD6-FXYD2A0A087WZ82 144 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 C9JCJ5 164 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 K7EQM0 130 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 GNRH2O43555 120 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 CXorf1O96002 111 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 IGLV2-11P01706 119 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 ORM1P02763 201 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 GYPEP15421 78 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 KRTAP10-2P60368 255 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 RPL7L1Q6DKI1 246 aaKnown RBP6.44□□□□□ -1.38
SF3B2-204ENST00000525207 LYPD5Q6UWN5 251 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 CYB561D1Q8N8Q1 229 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 TMEM75Q8N9X5 138 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 ACTR3CQ9C0K3 210 aaPredicted RBP6.44□□□□□ -1.38
SF3B2-204ENST00000525207 TNFSF18Q9UNG2 199 aa6.44□□□□□ -1.38
SF3B2-204ENST00000525207 G3V3Q6 166 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 GCGP01275 180 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 PFN1P07737 140 aaKnown RBP6.43□□□□□ -1.38
SF3B2-204ENST00000525207 GATA1P15976 413 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-204ENST00000525207 ZNF80P51504 273 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-204ENST00000525207 FLI1Q01543 452 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-204ENST00000525207 ZNF726P1Q15940 193 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 INO80EQ8NBZ0 244 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-204ENST00000525207 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 TXNDC17Q9BRA2 123 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 EPDR1Q9UM22 224 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 PSG8Q9UQ74 426 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
SF3B2-204ENST00000525207 BORCS7-ASMTA0A0B4J1R7 106 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 A0A1W2PRE2 83 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 FBLL1A6NHQ2 334 aaKnown RBP6.42□□□□□ -1.38
SF3B2-204ENST00000525207 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 SUMO1P63165 101 aaKnown RBP6.42□□□□□ -1.38
SF3B2-204ENST00000525207 SMUG1Q53HV7 270 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 OR2T35Q8NGX2 323 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
SF3B2-204ENST00000525207 K7EP13 123 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 TAAR5O14804 337 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 TIRAPP58753 221 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 DPPA3Q6W0C5 159 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 Q86TA4 180 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
SF3B2-204ENST00000525207 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 PEX7O00628 323 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 RS1O15537 224 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 RNASE3P12724 160 aaKnown RBP6.4□□□□□ -1.38
SF3B2-204ENST00000525207 RHOHQ15669 191 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 RGS21Q2M5E4 152 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 ZNF506Q5JVG8 444 aa6.4□□□□□ -1.38
SF3B2-204ENST00000525207 CFAP126Q5VTH2 177 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms