RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 RHOBP62745 196 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 SERF2P84101 59 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 RAB31Q13636 194 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 RBMY1FQ15415 496 aaKnown RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 ACOT6Q3I5F7 207 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 C1orf194Q5T5A4 169 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 LCN15Q6UWW0 184 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 Q6ZQT7 251 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 RBPMS2Q6ZRY4 209 aaKnown RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 SLC51BQ86UW2 128 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 BPIFA4PQ86YQ2 179 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 KRTAP11-1Q8IUC1 163 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 SBSPONQ8IVN8 264 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 OR8I2Q8N0Y5 310 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 EXOC3-AS1Q8N2X6 119 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF709Q8N972 641 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 OR1L4Q8NGR5 311 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 TYMSOSQ8TAI1 123 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 SUN5Q8TC36 379 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 BLNKQ8WV28 456 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 PPP1R14BQ96C90 147 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 GNPNAT1Q96EK6 184 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 FAM218AQ96MZ4 157 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 CHCHD5Q9BSY4 110 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 PAXXQ9BUH6 204 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 MRPL32Q9BYC8 188 aaKnown RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 OR51M1Q9H341 326 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 SRD5A3Q9H8P0 318 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 RETNQ9HD89 108 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF331Q9NQX6 463 aaPredicted RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 TMEM14CQ9P0S9 112 aa2.09□□□□□ -2.07
CSDE1-208ENST00000524652 YTHDF2Q9Y5A9 579 aaKnown RBP2.09□□□□□ -2.07
CSDE1-208ENST00000524652 PKD1P98161 4303 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 A0A0J9YX75 114 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 A0A1W2PPV4 95 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 MAP1LC3B2A6NCE7 125 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 HELTA6NFD8 242 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 OR4C46A6NHA9 309 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 A8MTW9 85 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 SNURFLB1AK76 121 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GGTLC3B5MD39 225 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 DNASE2O00115 360 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 ISLRO14498 428 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 CRXO43186 299 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 OR7C2O60412 319 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 PRM2P04554 102 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 NBEAP1P0C6P0 100 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 HIST1H1EP10412 219 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 RPL7P18124 248 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GCHFRP30047 84 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GALR1P47211 349 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 ATP5G3P48201 142 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 PSMB3P49720 205 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 FXYD7P58549 80 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 UBE2G2P60604 165 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 RANP62826 216 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GNG5P63218 68 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 UBE2L3P68036 154 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 ERCC8Q13216 396 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 PSG3Q16557 428 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 KHDC3LQ587J8 217 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 PSMG4Q5JS54 123 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 AKR1C8PQ5T2L2 129 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 PRR9Q5T870 116 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 TEX261Q6UWH6 196 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 AMTNQ6UX39 209 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 LYPD6BQ8NI32 183 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 FAM213BQ8TBF2 198 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 MRAPQ8TCY5 172 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 MBD3L1Q8WWY6 194 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 NARS2Q96I59 477 aaKnown RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GPR82Q96P67 336 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 GPR61Q9BZJ8 451 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 ACTR3CQ9C0K3 210 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 MAP1LC3BQ9GZQ8 125 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 SLC35B3Q9H1N7 401 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 Q9H3A6 140 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 SAV1Q9H4B6 383 aaPredicted RBP2.08□□□□□ -2.08
CSDE1-208ENST00000524652 TMEM231Q9H6L2 316 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 KCNIP2Q9NS61 270 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 ANAPC11Q9NYG5 84 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 DNAH8Q96JB1 4490 aa2.08□□□□□ -2.08
CSDE1-208ENST00000524652 IGLV4-3A0A075B6K6 122 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 TRAV12-2A0A075B6T6 113 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 IGKV2-40A0A087WW87 121 aaPredicted RBP2.07□□□□□ -2.08
CSDE1-208ENST00000524652 TRAV8-1A0A0A6YYK1 113 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 PGPA6NDG6 321 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 FAM74A7A6NL05 159 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 UMAD1C9J7I0 102 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 H3BMM0 161 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 TEX46H3BTG2 121 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 M0R2Z0 102 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF253O75346 499 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 CXorf1O96002 111 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 IGKV2D-40P01614 121 aaPredicted RBP2.07□□□□□ -2.08
CSDE1-208ENST00000524652 MBP02144 154 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms