RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 CDKN1BP46527 198 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 CRYGCP07315 174 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 FOXE3Q13461 319 aa10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 MRPL51Q4U2R6 128 aaKnown RBP10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 ALKBH7Q9BT30 221 aaPredicted RBP10.19□□□□□ -0.78
PCDHGB1-201ENST00000523390 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 SPRY2O43597 315 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 CDH23Q9H251 3354 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 CIDEAO60543 219 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 LGALS1P09382 135 aaKnown RBP10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 SFTA2Q6UW10 78 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
PCDHGB1-201ENST00000523390 BUB3O43684 328 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 PLP1P60201 277 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 MRPL16Q9NX20 251 aaKnown RBP10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 NHP2Q9NX24 153 aaKnown RBP10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 IGHV3-16A0A0C4DH30 117 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 SLURP1P55000 103 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 EIF4EBP1Q13541 118 aaPredicted RBP10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 ZC2HC1BQ5TFG8 222 aa10.17□□□□□ -0.78
PCDHGB1-201ENST00000523390 DNAH14Q0VDD8 3507 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 CFHR3Q02985 330 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 K7ERU9 68 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 ODF3BA8MYP8 253 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 Q6ZVH6 145 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
PCDHGB1-201ENST00000523390 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
PCDHGB1-201ENST00000523390 C1orf159Q96HA4 380 aa10.15□□□□□ -0.78
PCDHGB1-201ENST00000523390 NPYP01303 97 aa10.15□□□□□ -0.79
PCDHGB1-201ENST00000523390 C11orf71Q6IPW1 123 aa10.15□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGHG2P01859 326 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 FRMD6-AS1P0C7T7 363 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 COL5A1P20908 1838 aaPredicted RBP10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 H3BUT2 72 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 GNRH2O43555 120 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 DEFB1P60022 68 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 CFHR4Q92496 578 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 A0A087WX48 190 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 CCL24O00175 119 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 DEFB121Q5J5C9 76 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 STPG4Q8N801 248 aa10.14□□□□□ -0.79
PCDHGB1-201ENST00000523390 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 TRBV12-3P01733 135 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 EXPH5Q8NEV8 1989 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 WI2-2373I1.2A0A1W2PRP0 233 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 C20orf144Q9BQM9 153 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 HIST2H2BCQ6DN03 193 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
PCDHGB1-201ENST00000523390 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 A0A087X0K7 114 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 ATP6V0BQ99437 205 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGHV4OR15-8A0A075B7B6 117 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 A0A087WW49 117 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 C16orf54Q6UWD8 224 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 UNQ9165/PRO28630Q6UXU0 137 aa10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
PCDHGB1-201ENST00000523390 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 TP53TG1Q9Y2A0 90 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 COL4A2P08572 1712 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 A6NDX4 124 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE1Q13065 139 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE4Q13068 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE5Q13069 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 ZNF843Q8N446 348 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 OR5A1Q8NGJ0 315 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 ORAOV1Q8WV07 137 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 IGHV1-24A0A0C4DH33 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE12BA1L429 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE7O76087 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
PCDHGB1-201ENST00000523390 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms