RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	AMTN	Q6UX39	209 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	ZNF493	Q6ZR52	646 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	EXOC3-AS1	Q8N2X6	119 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	C15orf53	Q8NAA6	179 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	PAXX	Q9BUH6	204 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	OR51M1	Q9H341	326 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	GSN-AS1	Q9NRJ2	163 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	KCNIP2	Q9NS61	270 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	WDR83OS	Q9Y284	106 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	PYGO1	Q9Y3Y4	419 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	STAB2	Q8WWQ8	2551 aa		4.3	□□□□□ -1.72
EIF3E-216	ENST00000522887	TRGV1	A0A0A0MS02	117 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887		A0A1W2PPV4	95 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887		M0R3E3	92 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	CRX	O43186	299 aa	Predicted RBP	4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	MPDU1	O75352	247 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	NBEAP1	P0C6P0	100 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	CT45A10	P0DMU9	189 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	RAN	P62826	216 aa	Known RBP	4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	GCSAML	Q5JQS6	135 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	LINC00336	Q6ZUF6	198 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	MIR17HG	Q75NE6	70 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	IQCF2	Q8IXL9	164 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	CMTM2	Q8TAZ6	248 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	TMEM263	Q8WUH6	116 aa	Known RBP	4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	LINC00477	Q96M19	166 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	NPCDR1	Q9BY65	106 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	NMES1	Q9C002	83 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	ZNF586	Q9NXT0	402 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	OR5AC2	Q9NZP5	309 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	NAGK	Q9UJ70	344 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	PRELID1	Q9Y255	219 aa		4.29	□□□□□ -1.72
EIF3E-216	ENST00000522887	TRBV19	A0A075B6N1	114 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	TRAV26-1	A0A087WT03	109 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	C7orf71	A4D174	169 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	IGKV2D-40	P01614	121 aa	Predicted RBP	4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	IGHV3-53	P01767	116 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	SLC25A5	P05141	298 aa	Known RBP	4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	IGLC2	P0DOY2	106 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	RPL12	P30050	165 aa	Known RBP	4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	TAS2R45	P59539	299 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	BTN1A1	Q13410	526 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	RNF212	Q495C1	297 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	FAM74A1	Q5RGS3	127 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	PPP1R1C	Q8WVI7	109 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	C20orf144	Q9BQM9	153 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	GFRA4	Q9GZZ7	299 aa		4.28	□□□□□ -1.72
EIF3E-216	ENST00000522887	IGLV7-46	A0A075B6I9	117 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	TRGV4	A0A0C4DH28	118 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	MRPS12	O15235	138 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	EIF3G	O75821	320 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	M6PR	P20645	277 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	UBE2L3	P68036	154 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	CD300C	Q08708	224 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	LGALS9B	Q3B8N2	356 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	MUC21	Q5SSG8	566 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	SSX7	Q7RTT5	188 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	EIF4E3	Q8N5X7	224 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	PRAC1	Q96KF2	57 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	ATP5S	Q99766	215 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	PYGO2	Q9BRQ0	406 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	SLC25A2	Q9BXI2	301 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	MRPL32	Q9BYC8	188 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	WDR61	Q9GZS3	305 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	AGPAT4-IT1	Q9H0P7	198 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	MED28	Q9H204	178 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	TMEM14C	Q9P0S9	112 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	FUT9	Q9Y231	359 aa		4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.27	□□□□□ -1.73
EIF3E-216	ENST00000522887		A0A096LPF7	62 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	PGP	A6NDG6	321 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887		A8MTW9	85 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	HMGB3	O15347	200 aa	Known RBP	4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	MPC2	O95563	127 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	ZNF138	P52744	262 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	KHDC3L	Q587J8	217 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	FAM159A	Q6UWV7	190 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	LINC00299	Q6ZSB3	139 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887		Q6ZTI0	123 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	ZNF680	Q8NEM1	530 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887		Q8TAT8	98 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	PCNP	Q8WW12	178 aa	Known RBP	4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	MRPL53	Q96EL3	112 aa	Known RBP	4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	VGLL1	Q99990	258 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887		Q9H3A6	140 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	MRPL16	Q9NX20	251 aa	Known RBP	4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	MBD2	Q9UBB5	411 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	HSPB11	Q9Y547	144 aa		4.26	□□□□□ -1.73
EIF3E-216	ENST00000522887	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	IGHV1OR15-1	A0A075B7D0	117 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	NBDY	A0A0U1RRE5	68 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	ZNF253	O75346	499 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	IFITM3	Q01628	133 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	PDE6H	Q13956	83 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	TMEM183B	Q1AE95	376 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	C14orf177	Q52M58	125 aa		4.25	□□□□□ -1.73
EIF3E-216	ENST00000522887	TMEM183A	Q8IXX5	376 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms