RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-210	ENST00000522843	NIPSNAP3B	Q9BS92	247 aa		4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	SEC11C	Q9BY50	192 aa		4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	NKX6-2	Q9C056	277 aa	Predicted RBP	4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	MAP1LC3B	Q9GZQ8	125 aa		4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	TNXB	P22105	4242 aa		4.57	□□□□□ -1.68
SDCBP-210	ENST00000522843	TRAV2	A0A0B4J234	112 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843		C9JQL5	133 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843		K7EQG2	157 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF705D	P0CH99	300 aa	Predicted RBP	4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF705B	P0CI00	300 aa	Predicted RBP	4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	BCL2	P10415	239 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	GATA2	P23769	480 aa	Predicted RBP	4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	S100A7	P31151	101 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	FAM78B	Q5VT40	261 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	C10orf113	Q5VZT2	155 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	FAM122C	Q6P4D5	195 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	LCN15	Q6UWW0	184 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	ARL6IP6	Q8N6S5	226 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	ATG101	Q9BSB4	218 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	SLC35B3	Q9H1N7	401 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	MANBAL	Q9NQG1	85 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	TMEM167B	Q9NRX6	74 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	TMEM14C	Q9P0S9	112 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	XCL2	Q9UBD3	114 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843	VAX2	Q9UIW0	290 aa		4.56	□□□□□ -1.68
SDCBP-210	ENST00000522843		A0A1W2PRE2	83 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	TMEM250	H0YL14	139 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	DNASE2	O00115	360 aa	Predicted RBP	4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	GNG7	O60262	68 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	IFNA1	P01562	189 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	IGHV3-48	P01763	117 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	SRP19	P09132	144 aa	Known RBP	4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF688	P0C7X2	276 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	GCHFR	P30047	84 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	PAFAH1B2	P68402	229 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	TIGIT	Q495A1	244 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF600	Q6ZNG1	722 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	MIR17HG	Q75NE6	70 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	C15orf53	Q8NAA6	179 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	TCEAL7	Q9BRU2	100 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	SHANK2-AS3	Q9BTD1	123 aa		4.55	□□□□□ -1.68
SDCBP-210	ENST00000522843	FAM74A7	A6NL05	159 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	IFITM10	A6NMD0	228 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	VCY	O14598	125 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	MRPS12	O15235	138 aa	Known RBP	4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	PDE6D	O43924	150 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	COX7A2P2	O60397	106 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE7	O76087	117 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE12F	P0CL80	117 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE12G	P0CL81	117 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE12I	P0CL82	117 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	CRYBB3	P26998	211 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	MEF2B	Q02080	365 aa	Predicted RBP	4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	REL	Q04864	619 aa	Predicted RBP	4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE1	Q13065	139 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GAGE4	Q13068	117 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	FAM74A3	Q4VXF1	159 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843		Q56UQ5	140 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	C1orf194	Q5T5A4	169 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	SPATA31B1P	Q5VZV4	182 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	TOMM20L	Q6UXN7	152 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	LINC00305	Q7Z4B0	112 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	DCANP1	Q8TF63	244 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	FXYD5	Q96DB9	178 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	GRAMD2B	Q96HH9	432 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	LINC00052	Q96N35	136 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	SLC25A2	Q9BXI2	301 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	EIF5A2	Q9GZV4	153 aa	Known RBP	4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	OR51M1	Q9H341	326 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843		Q9H8V8	135 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	SLC25A22	Q9H936	323 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	RABAC1	Q9UI14	185 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	HIGD1A	Q9Y241	93 aa		4.54	□□□□□ -1.68
SDCBP-210	ENST00000522843	TMEM189	A5PLL7	270 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF98	A6NK75	572 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843		F6UZH7	168 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843		H3BRN7	92 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	BUB3	O43684	328 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	ZNF253	O75346	499 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	NBEAP1	P0C6P0	100 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	ARL14EPL	P0DKL9	152 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	HIST1H1E	P10412	219 aa	Known RBP	4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	ADCYAP1	P18509	176 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	ORM2	P19652	201 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	FGF8	P55075	233 aa	Predicted RBP	4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	PDE6H	Q13956	83 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	GFI1B	Q5VTD9	330 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	PRR26	Q8N8Z3	221 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	OR1B1	Q8NGR6	318 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	C11orf52	Q96A22	123 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	RPUSD4	Q96CM3	377 aa	Known RBP	4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	GPR82	Q96P67	336 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	PAXX	Q9BUH6	204 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843		Q9H3A6	140 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	TREM1	Q9NP99	234 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	DOK5	Q9P104	306 aa		4.53	□□□□□ -1.68
SDCBP-210	ENST00000522843	GNG13	Q9P2W3	67 aa		4.53	□□□□□ -1.68

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