RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PRR31Q5SQ13 230 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 GDF5OSQ5U4N7 250 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 Q6ZN92 141 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 GPR82Q96P67 336 aa9.25□□□□□ -0.93
PABPC1-219ENST00000522387 TRAV8-2A0A0B4J237 113 aa9.24□□□□□ -0.93
PABPC1-219ENST00000522387 LINC00614P0C842 121 aa9.24□□□□□ -0.93
PABPC1-219ENST00000522387 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
PABPC1-219ENST00000522387 ATOH7Q8N100 152 aa9.24□□□□□ -0.93
PABPC1-219ENST00000522387 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
PABPC1-219ENST00000522387 IGKV3-20P01619 116 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 PRR25Q96S07 402 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
PABPC1-219ENST00000522387 HSBP1O75506 76 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 DEFB131AP59861 70 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 MCRIP2Q9BUT9 160 aaKnown RBP9.23□□□□□ -0.93
PABPC1-219ENST00000522387 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 RNF24Q9Y225 148 aa9.23□□□□□ -0.93
PABPC1-219ENST00000522387 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 K7EQG2 157 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 SOCS3O14543 225 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 STPG4Q8N801 248 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 ZNF738Q8NE65 137 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 SSBP4Q9BWG4 385 aaPredicted RBP9.22□□□□□ -0.93
PABPC1-219ENST00000522387 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 ZFP30Q9Y2G7 519 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 M0R2Z0 102 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 INSL3P51460 131 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 MAJINQ3KP22 176 aa9.22□□□□□ -0.93
PABPC1-219ENST00000522387 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
PABPC1-219ENST00000522387 HIGD1CA8MV81 97 aa9.21□□□□□ -0.93
PABPC1-219ENST00000522387 CAMPP49913 170 aa9.21□□□□□ -0.93
PABPC1-219ENST00000522387 UBE2G1P62253 170 aa9.21□□□□□ -0.93
PABPC1-219ENST00000522387 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.93
PABPC1-219ENST00000522387 PMCHL1Q16048 86 aa9.21□□□□□ -0.93
PABPC1-219ENST00000522387 RNASEKQ6P5S7 137 aaKnown RBP9.21□□□□□ -0.93
PABPC1-219ENST00000522387 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.93
PABPC1-219ENST00000522387 ALKBH7Q9BT30 221 aaPredicted RBP9.21□□□□□ -0.93
PABPC1-219ENST00000522387 PPP1R14DQ9NXH3 145 aa9.21□□□□□ -0.93
PABPC1-219ENST00000522387 IGKV2-40A0A087WW87 121 aaPredicted RBP9.21□□□□□ -0.94
PABPC1-219ENST00000522387 A0A087X0K7 114 aa9.21□□□□□ -0.94
PABPC1-219ENST00000522387 KNCNA6PVL3 124 aa9.21□□□□□ -0.94
PABPC1-219ENST00000522387 IGKV2D-40P01614 121 aaPredicted RBP9.21□□□□□ -0.94
PABPC1-219ENST00000522387 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
PABPC1-219ENST00000522387 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
PABPC1-219ENST00000522387 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
PABPC1-219ENST00000522387 OR4C46A6NHA9 309 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 ERCC8Q13216 396 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 MAP6D1Q9H9H5 199 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 ID1P41134 155 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 PSG9Q00887 426 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 PDE6HQ13956 83 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 ATP5L2Q7Z4Y8 100 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 DEFB125Q8N687 156 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
PABPC1-219ENST00000522387 TRAV9-2A0A087WT02 112 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 A0A1B0GXF2 115 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 J3KRW8 73 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 TCRAP04437 139 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 TSPOP30536 169 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 PSG3Q16557 428 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 GTSCR1Q86UQ5 136 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 DNAH3Q8TD57 4116 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 HINT1P49773 126 aaPredicted RBP9.19□□□□□ -0.94
PABPC1-219ENST00000522387 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
PABPC1-219ENST00000522387 Q8TAT8 98 aa9.19□□□□□ -0.94
PABPC1-219ENST00000522387 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
PABPC1-219ENST00000522387 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 OR11H12B2RN74 326 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 VGLL1Q99990 258 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 RPP21Q9H633 154 aaKnown RBP9.18□□□□□ -0.94
PABPC1-219ENST00000522387 OTORQ9NRC9 128 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 MEGF8Q7Z7M0 2845 aa9.18□□□□□ -0.94
PABPC1-219ENST00000522387 FXYD7P58549 80 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 HBBP68871 147 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 BEAN1Q3B7T3 259 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 SMIM12Q96EX1 92 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 KLF12Q9Y4X4 402 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 C20orf202A1L168 122 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 CSN1S1P47710 185 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
PABPC1-219ENST00000522387 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
PABPC1-219ENST00000522387 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
PABPC1-219ENST00000522387 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
PABPC1-219ENST00000522387 A8MWL6 223 aa9.16□□□□□ -0.94
PABPC1-219ENST00000522387 P01737 135 aa9.16□□□□□ -0.94
PABPC1-219ENST00000522387 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
PABPC1-219ENST00000522387 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms