RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 PRIMA1Q86XR5 153 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 H3BMG7 143 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 IGLC1P0CG04 106 aa12.79□□□□□ -0.36
USP42-207ENST00000521713 HIVEP2P31629 2446 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 NCOR2Q9Y618 2525 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 IGHG4P01861 327 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 FGF6P10767 208 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 H3BRN7 92 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
USP42-207ENST00000521713 FGF23Q9GZV9 251 aaPredicted RBP12.78□□□□□ -0.36
USP42-207ENST00000521713 K7EMI3 77 aa12.77□□□□□ -0.36
USP42-207ENST00000521713 SPINK13Q1W4C9 94 aa12.77□□□□□ -0.36
USP42-207ENST00000521713 THAP8Q8NA92 274 aa12.77□□□□□ -0.36
USP42-207ENST00000521713 ZNF747Q9BV97 191 aa12.77□□□□□ -0.36
USP42-207ENST00000521713 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.36
USP42-207ENST00000521713 PTPN13Q12923 2485 aa12.77□□□□□ -0.37
USP42-207ENST00000521713 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
USP42-207ENST00000521713 PLXNB3Q9ULL4 1909 aa12.77□□□□□ -0.37
USP42-207ENST00000521713 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
USP42-207ENST00000521713 SPXQ9BT56 116 aa12.77□□□□□ -0.37
USP42-207ENST00000521713 ACYP1P07311 99 aa12.76□□□□□ -0.37
USP42-207ENST00000521713 NPYP01303 97 aa12.76□□□□□ -0.37
USP42-207ENST00000521713 DAD1P61803 113 aa12.76□□□□□ -0.37
USP42-207ENST00000521713 VWC2Q2TAL6 325 aa12.76□□□□□ -0.37
USP42-207ENST00000521713 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
USP42-207ENST00000521713 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
USP42-207ENST00000521713 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
USP42-207ENST00000521713 UBL5Q9BZL1 73 aa12.75□□□□□ -0.37
USP42-207ENST00000521713 FOXE3Q13461 319 aa12.75□□□□□ -0.37
USP42-207ENST00000521713 LINC01545Q5VT33 79 aa12.75□□□□□ -0.37
USP42-207ENST00000521713 PRSS57Q6UWY2 283 aa12.75□□□□□ -0.37
USP42-207ENST00000521713 IGHV1OR15-1A0A075B7D0 117 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 C20orf78Q9BR46 151 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 WIPF3A6NGB9 483 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 PRR20EP86478 221 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 PRR20CP86479 221 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 PRR20DP86480 221 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 PRR20BP86481 221 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 PRR20AP86496 221 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 NPBQ8NG41 125 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
USP42-207ENST00000521713 ADAMTS9Q9P2N4 1935 aa12.73□□□□□ -0.37
USP42-207ENST00000521713 CCL24O00175 119 aa12.73□□□□□ -0.37
USP42-207ENST00000521713 PRR25Q96S07 402 aa12.73□□□□□ -0.37
USP42-207ENST00000521713 A0A087WWL8 130 aa12.73□□□□□ -0.37
USP42-207ENST00000521713 NRGNQ92686 78 aa12.73□□□□□ -0.37
USP42-207ENST00000521713 PSCAO43653 123 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 C6orf226Q5I0X4 101 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 C15orf53Q8NAA6 179 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
USP42-207ENST00000521713 SRSF2Q01130 221 aaKnown RBP12.72□□□□□ -0.37
USP42-207ENST00000521713 ZNF491Q8N8L2 437 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 K7EN84 100 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
USP42-207ENST00000521713 F5H768 121 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 LTAP01374 205 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
USP42-207ENST00000521713 B5MCH6 92 aa12.71□□□□□ -0.37
USP42-207ENST00000521713 WISP2O76076 250 aa12.71□□□□□ -0.37
USP42-207ENST00000521713 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
USP42-207ENST00000521713 TEX48A0A1B0GUV7 120 aa12.71□□□□□ -0.37
USP42-207ENST00000521713 I3L3M4 83 aa12.71□□□□□ -0.38
USP42-207ENST00000521713 FXYD5Q96DB9 178 aa12.7□□□□□ -0.38
USP42-207ENST00000521713 IGHV7-81A0A0B4J1V7 117 aa12.7□□□□□ -0.38
USP42-207ENST00000521713 K7ERJ3 54 aa12.7□□□□□ -0.38
USP42-207ENST00000521713 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
USP42-207ENST00000521713 TMEM126AQ9H061 195 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 J3QQQ9 107 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 FOXI2Q6ZQN5 318 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 SCRT2Q9NQ03 307 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 AMTNQ6UX39 209 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
USP42-207ENST00000521713 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
USP42-207ENST00000521713 IGLL5B9A064 214 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 SS18Q15532 418 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 NDUFA12Q9UI09 145 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 KLK9Q9UKQ9 250 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 CFC1P0CG37 223 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
USP42-207ENST00000521713 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 TRAV13-2A0A0B4J235 113 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 TMEM258P61165 79 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 BLCAPP62952 87 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 ZMAT4Q9H898 229 aa12.68□□□□□ -0.38
USP42-207ENST00000521713 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
USP42-207ENST00000521713 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
USP42-207ENST00000521713 LOXL1Q08397 574 aaPredicted RBP12.67□□□□□ -0.38
USP42-207ENST00000521713 LYPD6Q86Y78 171 aa12.67□□□□□ -0.38
USP42-207ENST00000521713 ZC2HC1AQ96GY0 325 aa12.67□□□□□ -0.38
USP42-207ENST00000521713 SDHAF1A6NFY7 115 aa12.67□□□□□ -0.38
USP42-207ENST00000521713 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms