RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TRAV9-2A0A087WT02 112 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 TRAV5A0A0B4J249 113 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 H3BQ15 152 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 AGPAT2O15120 278 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 BCL2L11O43521 198 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 COX7A2P2O60397 106 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 PRAF2O60831 178 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 ZNF324O75467 553 aaPredicted RBP3.9□□□□□ -1.79
PABPC1-216ENST00000520868 CXCL2P19875 107 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 RNASE4P34096 147 aaKnown RBP3.9□□□□□ -1.79
PABPC1-216ENST00000520868 ERCC8Q13216 396 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 OPCMLQ14982 345 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 PYDC2Q56P42 97 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 C10orf113Q5VZT2 155 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 MZT2BQ6NZ67 158 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 OR10P1Q8NGE3 313 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 DYNC2LI1Q8TCX1 351 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 TMEM37Q8WXS4 190 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 SMIM8Q96KF7 97 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 C18orf15Q96N68 181 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 SLC25A21Q9BQT8 299 aaPredicted RBP3.9□□□□□ -1.79
PABPC1-216ENST00000520868 RNF24Q9Y225 148 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 PXMP4Q9Y6I8 212 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 ICOSQ9Y6W8 199 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.79
PABPC1-216ENST00000520868 C9orf170A2RU37 121 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 C7orf71A4D174 169 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 A8MU10 97 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 E5RGE8 158 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 K7EPK0 472 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 M0R3E3 92 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 SPINK4O60575 86 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 SLC25A5P05141 298 aaKnown RBP3.89□□□□□ -1.79
PABPC1-216ENST00000520868 IGLC2P0DOY2 106 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 AP3S2P59780 193 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 CD300CQ08708 224 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 BTN1A1Q13410 526 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
PABPC1-216ENST00000520868 ZNF546Q86UE3 836 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 EIF4E3Q8N5X7 224 aaKnown RBP3.89□□□□□ -1.79
PABPC1-216ENST00000520868 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 ZNF680Q8NEM1 530 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 RAB2BQ8WUD1 216 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 ODF3Q96PU9 254 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 MGST2Q99735 147 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 DNAJC4Q9NNZ3 241 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 MRPL16Q9NX20 251 aaKnown RBP3.89□□□□□ -1.79
PABPC1-216ENST00000520868 GSKIPQ9P0R6 139 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 PRO0255Q9UI72 69 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 LY96Q9Y6Y9 160 aa3.89□□□□□ -1.79
PABPC1-216ENST00000520868 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
PABPC1-216ENST00000520868 FNDC10F2Z333 226 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 MPDU1O75352 247 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 GPX1P07203 203 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 EVI2AP22794 236 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 CAMLGP49069 296 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 CRYBA4P53673 196 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 IAH1Q2TAA2 248 aaPredicted RBP3.88□□□□□ -1.79
PABPC1-216ENST00000520868 MIC13Q5XKP0 118 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 Q6ZQT7 251 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 Q6ZRG5 221 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 NEGR1Q7Z3B1 354 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 WFDC10BQ8IUB3 73 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 LINC00477Q96M19 166 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 MRPS26Q9BYN8 205 aaKnown RBP3.88□□□□□ -1.79
PABPC1-216ENST00000520868 SLIRPQ9GZT3 109 aaKnown RBP3.88□□□□□ -1.79
PABPC1-216ENST00000520868 AGPAT4-IT1Q9H0P7 198 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 FLVCR2Q9UPI3 526 aa3.88□□□□□ -1.79
PABPC1-216ENST00000520868 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TRGV4A0A0C4DH28 118 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 C7orf66A4D0T2 115 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 PSCAO43653 123 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TSC22D2O75157 780 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 OR4E1P0C645 316 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 SFTA3P0C7M3 94 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 SRIP30626 198 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 BCAP31P51572 246 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TMBIM6P55061 237 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TCL1AP56279 114 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 UBE2MP61081 183 aaKnown RBP3.87□□□□□ -1.79
PABPC1-216ENST00000520868 SLAQ13239 276 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 GUK1Q16774 197 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 NRARPQ7Z6K4 114 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 OR1L4Q8NGR5 311 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 BLNKQ8WV28 456 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 LINC00467Q9BRT7 94 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 GGACTQ9BVM4 153 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 MRPL32Q9BYC8 188 aaKnown RBP3.87□□□□□ -1.79
PABPC1-216ENST00000520868 PARLQ9H300 379 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 RCL1Q9Y2P8 373 aaKnown RBP3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TIMM9Q9Y5J7 89 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 V9GYH0 126 aa3.87□□□□□ -1.79
PABPC1-216ENST00000520868 TRBV19A0A075B6N1 114 aa3.86□□□□□ -1.79
PABPC1-216ENST00000520868 IGKV2-40A0A087WW87 121 aaPredicted RBP3.86□□□□□ -1.79
PABPC1-216ENST00000520868 FAM24AA6NFZ4 105 aa3.86□□□□□ -1.79
PABPC1-216ENST00000520868 KLLNB2CW77 178 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms