RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 OR4C12Q96R67 309 aa4.46□□□□□ -1.7
LSM1-202ENST00000520286 COMMD5Q9GZQ3 224 aa4.46□□□□□ -1.7
LSM1-202ENST00000520286 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.7
LSM1-202ENST00000520286 NBASA2RRP1 2371 aa4.46□□□□□ -1.7
LSM1-202ENST00000520286 NF1P21359 2839 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 LRBAP50851 2863 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 IGLV4-60A0A075B6I1 120 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 TMED7-TICAM2A0A0A6YYA0 188 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 IGHV1-3A0A0C4DH29 117 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 TMEM189A5PLL7 270 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 C2orf70A6NJV1 201 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 H0YGG7 62 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 K7EP34 96 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 CRXO43186 299 aaPredicted RBP4.45□□□□□ -1.7
LSM1-202ENST00000520286 SYNGR2O43760 224 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 BRI3O95415 125 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 CRYBB3P26998 211 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 OPRM1P35372 400 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 SEC11AP67812 179 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 HIST1H1AQ02539 215 aaPredicted RBP4.45□□□□□ -1.7
LSM1-202ENST00000520286 SHISA6Q6ZSJ9 500 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 OR2Z1Q8NG97 314 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 TSKUQ8WUA8 353 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 APOBEC3DQ96AK3 386 aaPredicted RBP4.45□□□□□ -1.7
LSM1-202ENST00000520286 ZNF835Q9Y2P0 537 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 V9GYV3 84 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 EXPH5Q8NEV8 1989 aa4.45□□□□□ -1.7
LSM1-202ENST00000520286 ARID1AO14497 2285 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 PDCD6O75340 191 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ATP5G3P48201 142 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 UBE2G1P62253 170 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ZNF90Q03938 601 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 SLC38A11Q08AI6 406 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ZNF816Q0VGE8 651 aaPredicted RBP4.44□□□□□ -1.7
LSM1-202ENST00000520286 EBLN2Q6P2I7 272 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 RASL11AQ6T310 242 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ZNF818PQ6ZRF7 136 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ZNF439Q8NDP4 499 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ST6GALNAC3Q8NDV1 305 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 OR5A2Q8NGI9 324 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 OR5A1Q8NGJ0 315 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 OR2AE1Q8NHA4 323 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 BLNKQ8WV28 456 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 PMCHL2Q9BQD1 86 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 FAM103A1Q9BTL3 118 aaKnown RBP4.44□□□□□ -1.7
LSM1-202ENST00000520286 TMEM147Q9BVK8 224 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 MS4A6AQ9H2W1 248 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 PSENENQ9NZ42 101 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 ZNF391Q9UJN7 358 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 CELSR2Q9HCU4 2923 aa4.44□□□□□ -1.7
LSM1-202ENST00000520286 SPTBN1Q01082 2364 aaKnown RBP4.43□□□□□ -1.7
LSM1-202ENST00000520286 UBE2L5PA0A1B0GUS4 154 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 H3BP45 60 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 H3BRM9 83 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 PGLYRP1O75594 196 aaPredicted RBP4.43□□□□□ -1.7
LSM1-202ENST00000520286 IGKV1-39P01597 117 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 IGKV1D-39P04432 117 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 EIF4EBP1Q13541 118 aaPredicted RBP4.43□□□□□ -1.7
LSM1-202ENST00000520286 NNATQ16517 81 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 TMEM42Q69YG0 159 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 SLC25A34Q6PIV7 304 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 FOXI2Q6ZQN5 318 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 SPATA12Q7Z6I5 190 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 C18orf32Q8TCD1 76 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 BORCS7Q96B45 105 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 DERL1Q9BUN8 251 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 NPVFQ9HCQ7 196 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 WASHC3Q9Y3C0 194 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 ARL2-SNX15V9GYD0 113 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 F8P00451 2351 aa4.43□□□□□ -1.7
LSM1-202ENST00000520286 COL27A1Q8IZC6 1860 aaPredicted RBP4.43□□□□□ -1.7
LSM1-202ENST00000520286 ABCA2Q9BZC7 2435 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 TRGV10A0A0A0MS01 117 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 SMIM27A0A1W2PRY6 76 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 A8MWL6 223 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 GNG7O60262 68 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 HAND1O96004 215 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 MT-CO2P00403 227 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 IGKV1-5P01602 117 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 IL4P05112 153 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 AZU1P20160 251 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 CA7P43166 264 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 CRYBA4P53673 196 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 RBM11P57052 281 aaKnown RBP4.42□□□□□ -1.7
LSM1-202ENST00000520286 CD164Q04900 197 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 HSD52Q0P140 79 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 C2orf91Q6ZV80 131 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 PRNTQ86SH4 94 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 PDPNQ86YL7 162 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 GPR82Q96P67 336 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
LSM1-202ENST00000520286 NPCDR1Q9BY65 106 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms