RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 MRPL16Q9NX20 251 aaKnown RBP5.94□□□□□ -1.46
TRIM35-202ENST00000519219 GNG13Q9P2W3 67 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 FUT9Q9Y231 359 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
TRIM35-202ENST00000519219 A0A087WTM6 91 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 C7orf71A4D174 169 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 OR7C2O60412 319 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 ZNF324O75467 553 aaPredicted RBP5.93□□□□□ -1.46
TRIM35-202ENST00000519219 CXorf1O96002 111 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 PPT1P50897 306 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 ERVFC1-1P60608 527 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 ZNF726P1Q15940 193 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 GUK1Q16774 197 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 MBD3L1Q8WWY6 194 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 FAM19A4Q96LR4 140 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 FAM210AQ96ND0 272 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 ODF3Q96PU9 254 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 DNAJC4Q9NNZ3 241 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 MANBALQ9NQG1 85 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 PGPEP1Q9NXJ5 209 aa5.93□□□□□ -1.46
TRIM35-202ENST00000519219 TRAV1-1A0A0B4J248 108 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 KLLNB2CW77 178 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 PAX4O43316 350 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 SPINK4O60575 86 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 EIF3GO75821 320 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRIM35-202ENST00000519219 NDUFB4O95168 129 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 ARL14EPLP0DKL9 152 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 RNASE4P34096 147 aaKnown RBP5.92□□□□□ -1.46
TRIM35-202ENST00000519219 CEBPGP53567 150 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 LYPD5Q6UWN5 251 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 MIR17HGQ75NE6 70 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 WFDC10BQ8IUB3 73 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 C18orf15Q96N68 181 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 C8orf49Q96NF6 230 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 AGPAT4-IT1Q9H0P7 198 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 ICOSQ9Y6W8 199 aa5.92□□□□□ -1.46
TRIM35-202ENST00000519219 IGKV2-40A0A087WW87 121 aaPredicted RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 RBFOX3A6NFN3 312 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 KRBOX1C9JBD0 128 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 IGKV2D-40P01614 121 aaPredicted RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 SLC25A5P05141 298 aaKnown RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 STAG3L2P0CL84 134 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 STAG3L3P0CL85 134 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 PYYP10082 97 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 BCL2P10415 239 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 TAGLN2P37802 199 aaKnown RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 CRYBA4P53673 196 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 TCL1AP56279 114 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 UBE2L3P68036 154 aaKnown RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 CCL20P78556 96 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 FHL2Q14192 279 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 PQLC2Q6ZP29 291 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 EXOC3-AS1Q8N2X6 119 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 EIF4E3Q8N5X7 224 aaKnown RBP5.91□□□□□ -1.46
TRIM35-202ENST00000519219 ZFAND2AQ8N6M9 145 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 LYPD6BQ8NI32 183 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 FRZBQ92765 325 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 TMEM167BQ9NRX6 74 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 RNF24Q9Y225 148 aa5.91□□□□□ -1.46
TRIM35-202ENST00000519219 TRBV19A0A075B6N1 114 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 F8W036 122 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 SFTA3P0C7M3 94 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 GCHFRP30047 84 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 UBE2G2P60604 165 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 ICAM4Q14773 271 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 CST9LP1Q5W188 147 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 VGLL1Q99990 258 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 LINC00467Q9BRT7 94 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 PAXXQ9BUH6 204 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 VAX2Q9UIW0 290 aa5.9□□□□□ -1.46
TRIM35-202ENST00000519219 EREGO14944 169 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 PAGE4O60829 102 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 OR10J4P0C629 311 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 CRISP2P16562 243 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF506Q5JVG8 444 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 Q8TAT8 98 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 BLNKQ8WV28 456 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 MRPL53Q96EL3 112 aaKnown RBP5.89□□□□□ -1.47
TRIM35-202ENST00000519219 SLC25A2Q9BXI2 301 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 OR51M1Q9H341 326 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 SMDT1Q9H4I9 107 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 PRO0255Q9UI72 69 aa5.89□□□□□ -1.47
TRIM35-202ENST00000519219 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM218A2RU14 115 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF253O75346 499 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 APOC3P02656 99 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 GPX1P07203 203 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 GCSHP23434 173 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
TRIM35-202ENST00000519219 MEF2BQ02080 365 aaPredicted RBP5.88□□□□□ -1.47
TRIM35-202ENST00000519219 MUC21Q5SSG8 566 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 IBA57Q5T440 356 aaKnown RBP5.88□□□□□ -1.47
TRIM35-202ENST00000519219 C9orf47Q6ZRZ4 202 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF479Q96JC4 524 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 HHLA3Q9XRX5 114 aa5.88□□□□□ -1.47
TRIM35-202ENST00000519219 LY96Q9Y6Y9 160 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms