RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 NAGKQ9UJ70 344 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
TRAM1-202ENST00000518678 PGPEP1LA6NFU8 196 aa12.73□□□□□ -0.37
TRAM1-202ENST00000518678 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
TRAM1-202ENST00000518678 EDA2RQ9HAV5 297 aa12.73□□□□□ -0.37
TRAM1-202ENST00000518678 PLAC8L1A1L4L8 177 aa12.72□□□□□ -0.37
TRAM1-202ENST00000518678 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
TRAM1-202ENST00000518678 MGST1P10620 155 aaKnown RBP12.72□□□□□ -0.37
TRAM1-202ENST00000518678 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
TRAM1-202ENST00000518678 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 LINC00862A6NCI5 91 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 OCC1Q8TAD7 63 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 SDF2L1Q9HCN8 221 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 BIN3Q9NQY0 253 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
TRAM1-202ENST00000518678 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
TRAM1-202ENST00000518678 ORM1P02763 201 aa12.7□□□□□ -0.38
TRAM1-202ENST00000518678 TYMSP04818 313 aa12.7□□□□□ -0.38
TRAM1-202ENST00000518678 EMP1P54849 157 aa12.7□□□□□ -0.38
TRAM1-202ENST00000518678 IBA57Q5T440 356 aaKnown RBP12.7□□□□□ -0.38
TRAM1-202ENST00000518678 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
TRAM1-202ENST00000518678 K7EN84 100 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 GNRH2O43555 120 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 COMMD7Q86VX2 200 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 LYSTQ99698 3801 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 GSN-AS1Q9NRJ2 163 aa12.69□□□□□ -0.38
TRAM1-202ENST00000518678 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 C19orf71A6NCJ1 209 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 B4DEV8 164 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 TCL1AP56279 114 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 ZNF415Q09FC8 603 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 IL17DQ8TAD2 202 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 MDFICQ9P1T7 246 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 DKK2Q9UBU2 259 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
TRAM1-202ENST00000518678 TIMM8BQ9Y5J9 83 aaPredicted RBP12.68□□□□□ -0.38
TRAM1-202ENST00000518678 LYRM9A8MSI8 78 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 M0R036 132 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 SPART-AS1P0CW21 52 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
TRAM1-202ENST00000518678 OR5I1Q13606 314 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 TMEM241Q24JQ0 296 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 LINC01551Q86U37 167 aa12.67□□□□□ -0.38
TRAM1-202ENST00000518678 DAZAP1Q96EP5 407 aaKnown RBP12.67□□□□□ -0.38
TRAM1-202ENST00000518678 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
TRAM1-202ENST00000518678 CXorf65A6NEN9 183 aa12.66□□□□□ -0.38
TRAM1-202ENST00000518678 ZNF575Q86XF7 245 aa12.66□□□□□ -0.38
TRAM1-202ENST00000518678 NOP10Q9NPE3 64 aaKnown RBP12.66□□□□□ -0.38
TRAM1-202ENST00000518678 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
TRAM1-202ENST00000518678 DNLZQ5SXM8 178 aa12.65□□□□□ -0.38
TRAM1-202ENST00000518678 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
TRAM1-202ENST00000518678 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 P01737 135 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 CXCL1P09341 107 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 ASIPP42127 132 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 RPL19P84098 196 aaKnown RBP12.64□□□□□ -0.39
TRAM1-202ENST00000518678 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 SPXQ9BT56 116 aa12.64□□□□□ -0.39
TRAM1-202ENST00000518678 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
TRAM1-202ENST00000518678 SPINK4O60575 86 aa12.63□□□□□ -0.39
TRAM1-202ENST00000518678 RNASE3P12724 160 aaKnown RBP12.63□□□□□ -0.39
TRAM1-202ENST00000518678 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
TRAM1-202ENST00000518678 FAM231DQ6ZW35 169 aa12.63□□□□□ -0.39
TRAM1-202ENST00000518678 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
TRAM1-202ENST00000518678 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
TRAM1-202ENST00000518678 TENM2Q9NT68 2774 aa12.63□□□□□ -0.39
TRAM1-202ENST00000518678 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
TRAM1-202ENST00000518678 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
TRAM1-202ENST00000518678 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
TRAM1-202ENST00000518678 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
TRAM1-202ENST00000518678 NANOS2P60321 138 aaKnown RBP12.62□□□□□ -0.39
TRAM1-202ENST00000518678 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
TRAM1-202ENST00000518678 LINC00612Q8N6U2 182 aa12.62□□□□□ -0.39
TRAM1-202ENST00000518678 OR2D3Q8NGH3 330 aa12.62□□□□□ -0.39
TRAM1-202ENST00000518678 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
TRAM1-202ENST00000518678 DAD1P61803 113 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 ADIRFQ15847 76 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
TRAM1-202ENST00000518678 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
TRAM1-202ENST00000518678 H3BVH4 76 aa12.6□□□□□ -0.39
TRAM1-202ENST00000518678 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
TRAM1-202ENST00000518678 Q6ZTI0 123 aa12.6□□□□□ -0.39
TRAM1-202ENST00000518678 RPP21Q9H633 154 aaKnown RBP12.6□□□□□ -0.39
TRAM1-202ENST00000518678 GAGE12BA1L429 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 XKRY2A2RUG3 117 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 M0R2P5 195 aa12.59□□□□□ -0.39
TRAM1-202ENST00000518678 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms