RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PRSS3P35030 304 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 LEPP41159 167 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 IBA57Q5T440 356 aaKnown RBP3.98□□□□□ -1.77
CCDC6-203ENST00000518638 FAAP20Q6NZ36 180 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 LGI3Q8N145 548 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 OR1S1Q8NH92 325 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 SUN5Q8TC36 379 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 RPUSD4Q96CM3 377 aaKnown RBP3.98□□□□□ -1.77
CCDC6-203ENST00000518638 C9orf85Q96MD7 179 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 SLC50A1Q9BRV3 221 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 MRPL32Q9BYC8 188 aaKnown RBP3.98□□□□□ -1.77
CCDC6-203ENST00000518638 OR51M1Q9H341 326 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 TXNL4BQ9NX01 149 aaKnown RBP3.98□□□□□ -1.77
CCDC6-203ENST00000518638 SSR3Q9UNL2 185 aa3.98□□□□□ -1.77
CCDC6-203ENST00000518638 DNAH8Q96JB1 4490 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 IGKV1D-37A0A075B6S9 117 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 TRAV8-3A0A0A6YYJ7 113 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 RBFOX3A6NFN3 312 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 CRYM-AS1A6NIL9 109 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 SPINK4O60575 86 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 TNFAIP8O95379 198 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 SLC25A5P05141 298 aaKnown RBP3.97□□□□□ -1.77
CCDC6-203ENST00000518638 HLA-DMAP28067 261 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 TCL1AP56279 114 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 SRPXP78539 464 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 UBE2NLQ5JXB2 153 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 LCN15Q6UWW0 184 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 Q8N976 141 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 DTD1Q8TEA8 209 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 SLC25A31Q9H0C2 315 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 SH3BGRL3Q9H299 93 aa3.97□□□□□ -1.77
CCDC6-203ENST00000518638 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
CCDC6-203ENST00000518638 A0A0G2JRQ6 117 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 H3BRN7 92 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 CDS2O95674 445 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 APOA1P02647 267 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 SULT1A3P0DMM9 295 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 SULT1A4P0DMN0 295 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 ORM2P19652 201 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 ZNF846Q147U1 533 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 EIF4E3Q8N5X7 224 aaKnown RBP3.96□□□□□ -1.78
CCDC6-203ENST00000518638 C11orf72Q8NBR9 251 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 OR5H6Q8NGV6 325 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 ATP6V0E2Q8NHE4 81 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 RMI2Q96E14 147 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 ATP5SQ99766 215 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 TMEM222Q9H0R3 208 aa3.96□□□□□ -1.78
CCDC6-203ENST00000518638 LRP2P98164 4655 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 TRAV12-3A0A0B4J271 114 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 A0A0D9SG52 128 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 H7C423 109 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 SEC11BP0C7V7 166 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 AKR1C4P17516 323 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 TBPP20226 339 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 SDC2P34741 201 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 CCR6P51684 374 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 NDUFV3P56181 108 aaKnown RBP3.95□□□□□ -1.78
CCDC6-203ENST00000518638 SP6Q3SY56 376 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 RNASE10Q5GAN6 216 aaKnown RBP3.95□□□□□ -1.78
CCDC6-203ENST00000518638 BLNKQ8WV28 456 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 TREM1Q9NP99 234 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 C14orf166Q9Y224 244 aaKnown RBP3.95□□□□□ -1.78
CCDC6-203ENST00000518638 HIGD1AQ9Y241 93 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 KCNIP3Q9Y2W7 256 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 TNXBP22105 4242 aa3.95□□□□□ -1.78
CCDC6-203ENST00000518638 SMIM31A0A1B0GVY4 71 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 C7orf71A4D174 169 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 FABP12A6NFH5 140 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 IGHV3-53P01767 116 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 SELENOTP62341 195 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 AKR1C1Q04828 323 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 MXD1Q05195 221 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 OR10J3Q5JRS4 329 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 LHFPL1Q86WI0 220 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 ZNF431Q8TF32 576 aaPredicted RBP3.94□□□□□ -1.78
CCDC6-203ENST00000518638 IL22RA2Q969J5 263 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 CIB3Q96Q77 187 aaPredicted RBP3.94□□□□□ -1.78
CCDC6-203ENST00000518638 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 RBKSQ9H477 322 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 ZNF331Q9NQX6 463 aaPredicted RBP3.94□□□□□ -1.78
CCDC6-203ENST00000518638 PXMP4Q9Y6I8 212 aa3.94□□□□□ -1.78
CCDC6-203ENST00000518638 IGKV1OR2-108A0A075B7D4 117 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 TRAV8-1A0A0A6YYK1 113 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 MPDU1O75352 247 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 HYPMO75409 117 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 IL5P05113 134 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 PFN1P07737 140 aaKnown RBP3.93□□□□□ -1.78
CCDC6-203ENST00000518638 SMCO1Q147U7 214 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 SURF2Q15527 256 aaPredicted RBP3.93□□□□□ -1.78
CCDC6-203ENST00000518638 ACOT7LQ6ZUV0 252 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 BPIFA4PQ86YQ2 179 aa3.93□□□□□ -1.78
CCDC6-203ENST00000518638 SELENOHQ8IZQ5 122 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms