RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 OR11H4Q8NGC9 324 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 RASL10AQ92737 203 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 ZNF479Q96JC4 524 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 TMEM167BQ9NRX6 74 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 PSG8Q9UQ74 426 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
MRPS28-202ENST00000518271 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 SERTM2A0A1B0GWG4 89 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 SUMO1P63165 101 aaKnown RBP8.4□□□□□ -1.06
MRPS28-202ENST00000518271 TNP2Q05952 138 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 CYB561D1Q8N8Q1 229 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 SPXQ9BT56 116 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 Q9H8V8 135 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 EPDR1Q9UM22 224 aa8.4□□□□□ -1.06
MRPS28-202ENST00000518271 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
MRPS28-202ENST00000518271 PAX4O43316 350 aa8.39□□□□□ -1.07
MRPS28-202ENST00000518271 FGF8P55075 233 aaPredicted RBP8.39□□□□□ -1.07
MRPS28-202ENST00000518271 FLI1Q01543 452 aaPredicted RBP8.39□□□□□ -1.07
MRPS28-202ENST00000518271 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
MRPS28-202ENST00000518271 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
MRPS28-202ENST00000518271 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 TAAR5O14804 337 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 GCGP01275 180 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 FHITP49789 147 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 UBE2G2P60604 165 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 ZNF345Q14585 488 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 SOHLH1Q5JUK2 328 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 KCNRGQ8N5I3 272 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 HHLA3Q9XRX5 114 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
MRPS28-202ENST00000518271 TRAV4A0A0B4J268 109 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 M0R2P5 195 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 PRNTQ86SH4 94 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 Q86TA4 180 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 ZNF575Q86XF7 245 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 C9orf85Q96MD7 179 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 NDFIP1Q9BT67 221 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 SDF2L1Q9HCN8 221 aa8.37□□□□□ -1.07
MRPS28-202ENST00000518271 K7EQD1 137 aa8.36□□□□□ -1.07
MRPS28-202ENST00000518271 PEX7O00628 323 aa8.36□□□□□ -1.07
MRPS28-202ENST00000518271 PFN1P07737 140 aaKnown RBP8.36□□□□□ -1.07
MRPS28-202ENST00000518271 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
MRPS28-202ENST00000518271 KCNS1Q96KK3 526 aa8.36□□□□□ -1.07
MRPS28-202ENST00000518271 ARL2-SNX15V9GYD0 113 aa8.36□□□□□ -1.07
MRPS28-202ENST00000518271 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 A0A1W2PPQ1 181 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 HMSDA8MTL9 139 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 K7EQM0 130 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 NXPH4O95158 308 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
MRPS28-202ENST00000518271 SLAQ13239 276 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 TTC32Q5I0X7 151 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
MRPS28-202ENST00000518271 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
MRPS28-202ENST00000518271 IGKV3D-20A0A0C4DH25 116 aa8.34□□□□□ -1.07
MRPS28-202ENST00000518271 FBLL1A6NHQ2 334 aaKnown RBP8.34□□□□□ -1.07
MRPS28-202ENST00000518271 BCL2L11O43521 198 aa8.34□□□□□ -1.07
MRPS28-202ENST00000518271 GYPEP15421 78 aa8.34□□□□□ -1.07
MRPS28-202ENST00000518271 CRIP1P50238 77 aa8.34□□□□□ -1.07
MRPS28-202ENST00000518271 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
MRPS28-202ENST00000518271 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
MRPS28-202ENST00000518271 PGPEP1LA6NFU8 196 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 SIVA1O15304 175 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 RS1O15537 224 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 IFNA7P01567 189 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 LINC00315P59091 139 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 ZNF506Q5JVG8 444 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 PTH2Q96A98 100 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 KRTAP17-1Q9BYP8 105 aa8.33□□□□□ -1.08
MRPS28-202ENST00000518271 C9JCJ5 164 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 ZNF876PQ49A33 203 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 ZFP69Q49AA0 526 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 NEGR1Q7Z3B1 354 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 WFDC10BQ8IUB3 73 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
MRPS28-202ENST00000518271 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-202ENST00000518271 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
MRPS28-202ENST00000518271 ORM1P02763 201 aa8.31□□□□□ -1.08
MRPS28-202ENST00000518271 SRIP30626 198 aa8.31□□□□□ -1.08
MRPS28-202ENST00000518271 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
MRPS28-202ENST00000518271 ZNF471Q9BX82 626 aaPredicted RBP8.31□□□□□ -1.08
MRPS28-202ENST00000518271 A0A0D9SG52 128 aa8.3□□□□□ -1.08
MRPS28-202ENST00000518271 SH2D1AO60880 128 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms