RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 MRPL16Q9NX20 251 aaKnown RBP7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 TRGV11A0A075B6L2 103 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 A0A096LPF7 62 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 C16orf90A8MZG2 172 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 HMGB3O15347 200 aaKnown RBP7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 PAX4O43316 350 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 MBP02144 154 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 CDC34P49427 236 aaPredicted RBP7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 SERF2P84101 59 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 TTC32Q5I0X7 151 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 FAM159AQ6UWV7 190 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 GOLT1AQ6ZVE7 132 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 PCNPQ8WW12 178 aaKnown RBP7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 SPXQ9BT56 116 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 PSMG3Q9BT73 122 aaPredicted RBP7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 MDFICQ9P1T7 246 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 RPH3ALQ9UNE2 315 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 NACAE9PAV3 2078 aa7.3□□□□□ -1.24
PDGFRB-203ENST00000517660 A0A1W2PPQ1 181 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 IGHV3-53P01767 116 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 STAG3L2P0CL84 134 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 STAG3L3P0CL85 134 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TPT1P13693 172 aaKnown RBP7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 ATP6V0CP27449 155 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TNP2Q05952 138 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 FHL2Q14192 279 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TMEM183BQ1AE95 376 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TDRG1Q3Y452 100 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TMEM183AQ8IXX5 376 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 RASL10AQ92737 203 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 RAB24Q969Q5 203 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TREM1Q9NP99 234 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 PRO0255Q9UI72 69 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 HHLA3Q9XRX5 114 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 ICOSQ9Y6W8 199 aa7.29□□□□□ -1.24
PDGFRB-203ENST00000517660 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 SERTM2A0A1B0GWG4 89 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 BTF3P20290 206 aaKnown RBP7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 GCHFRP30047 84 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 CRYBA4P53673 196 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 IQCF2Q8IXL9 164 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 SUN5Q8TC36 379 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 TVP23CQ96ET8 276 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 C8orf49Q96NF6 230 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 ACTR3CQ9C0K3 210 aaPredicted RBP7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 NAGKQ9UJ70 344 aa7.28□□□□□ -1.24
PDGFRB-203ENST00000517660 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 BORCS7-ASMTA0A0B4J1R7 106 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 TRGV4A0A0C4DH28 118 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 TAAR5O14804 337 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 GNRH2O43555 120 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 GNG5P63218 68 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 C5orf17Q8NAS9 161 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 TMEM167BQ9NRX6 74 aa7.27□□□□□ -1.25
PDGFRB-203ENST00000517660 IGHV3-16A0A0C4DH30 117 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 K7EQM0 130 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 M0R2P5 195 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 CXorf1O96002 111 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 TCRAP04437 139 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 INAFM2P0DMQ5 153 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 RPL7L1Q6DKI1 246 aaKnown RBP7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 LYPD5Q6UWN5 251 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 KCNS1Q96KK3 526 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 SGK494Q96LW2 274 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 NDFIP1Q9BT67 221 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 KRTAP1-5Q9BYS1 174 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 SH3BGRL3Q9H299 93 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 SDF2L1Q9HCN8 221 aa7.26□□□□□ -1.25
PDGFRB-203ENST00000517660 F6UZH7 168 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 SIVA1O15304 175 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 NXPH4O95158 308 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 SFTA3P0C7M3 94 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 SUMO1P63165 101 aaKnown RBP7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 NEGR1Q7Z3B1 354 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 OR4C5Q8NGB2 326 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 ZNF479Q96JC4 524 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 EPDR1Q9UM22 224 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 PSG8Q9UQ74 426 aa7.25□□□□□ -1.25
PDGFRB-203ENST00000517660 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 TRAV4A0A0B4J268 109 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 A0A1W2PRE2 83 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 FBLL1A6NHQ2 334 aaKnown RBP7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 ORM1P02763 201 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 TYMSP04818 313 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 TOR2AQ5JU69 321 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 CYTL1Q9NRR1 136 aa7.24□□□□□ -1.25
PDGFRB-203ENST00000517660 GGTLC3B5MD39 225 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 K7EQD1 137 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 GCGP01275 180 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 IGLV2-11P01706 119 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 GYPEP15421 78 aa7.23□□□□□ -1.25
PDGFRB-203ENST00000517660 SRIP30626 198 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms