RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 ZNF142P52746 1687 aaPredicted RBP-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 A0A1B0GW64 132 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 CDC42EP2O14613 210 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 DEGS1O15121 323 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 MFSD11O43934 449 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 SERPINA1P01009 418 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 DEFA3P59666 94 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 DNAJB13P59910 316 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 PSME3P61289 254 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 SDHAF4Q5VUM1 108 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 C4orf33Q8N1A6 199 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR4S1Q8NGB4 309 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 SCP2D1Q9UJQ7 156 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 TPRKBQ9Y3C4 175 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 ZMYM4Q5VZL5 1548 aa-3.91□□□□□ -3.04
SNORA40.13-201ENST00000516379 ZNF609O15014 1411 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 FMN1Q68DA7 1419 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 hCG_1818297A0A087WSY0 165 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 A8MT66 165 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 K7ERJ3 54 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR2H2O95918 312 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 CRHP06850 196 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 CCL3L1P16619 93 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 ERVS71-1P61550 626 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 ACOT6Q3I5F7 207 aaPredicted RBP-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 CCSMST1Q4G0I0 132 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 FAM216BQ8N7L0 139 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 DNAJB3Q8WWF6 145 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 DGCR14Q96DF8 476 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 EYSQ5T1H1 3165 aa-3.92□□□□□ -3.04
SNORA40.13-201ENST00000516379 ADAMTS12P58397 1594 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 APOC1P02654 83 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 Q3ZCU0 254 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 LRRC20Q8TCA0 184 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 SCN3BQ9NY72 215 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 IFT172Q9UG01 1749 aa-3.93□□□□□ -3.04
SNORA40.13-201ENST00000516379 LRP5O75197 1615 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 TRAV5A0A0B4J249 113 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 FAM236DA0A1B0GTK5 79 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 H3BNG1 76 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 IFNA4P05014 189 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 FAM236CP0DP71 79 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 LCN1P31025 176 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 SSBP1Q04837 148 aaKnown RBP-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 IAH1Q2TAA2 248 aaPredicted RBP-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 ARL6IP6Q8N6S5 226 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR5AK2Q8NH90 309 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 MAP1LC3BQ9GZQ8 125 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 V9GYV3 84 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 ARFGEF1Q9Y6D6 1849 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 MYO9AB2RTY4 2548 aa-3.94□□□□□ -3.04
SNORA40.13-201ENST00000516379 PTPN23Q9H3S7 1636 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 TMEM189A5PLL7 270 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 ARPP19P56211 112 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 POU6F1Q14863 301 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 C9orf62Q8N4C0 152 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 RAB8BQ92930 207 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR2H1Q9GZK4 316 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 VPS29Q9UBQ0 182 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 ABCC11Q96J66 1382 aa-3.95□□□□□ -3.04
SNORA40.13-201ENST00000516379 F8VZ95 297 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 H0YIV9 168 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 SMLR1H3BR10 107 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 PFDN6O15212 129 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 SSNA1O43805 119 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 ATP5HO75947 161 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 NCR2O95944 276 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 C8GP07360 202 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 TAF1AQ15573 450 aaPredicted RBP-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 DEFB123Q8N688 67 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 CT55Q8WUE5 264 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 PARP14Q460N5 1801 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 KIAA1107Q9UPP5 1409 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 ANKRD31Q8N7Z5 1873 aa-3.96□□□□□ -3.04
SNORA40.13-201ENST00000516379 ACACBO00763 2458 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 TRAV1-2A0A0B4J238 106 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 CSTAP01040 98 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 TRACP01848 142 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 CXCL1P09341 107 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 C8orf88P0DMB2 117 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 S100A3P33764 101 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 HIST2H3PS2Q5TEC6 136 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR6V1Q8N148 313 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 OR10X1Q8NGY0 326 aa-3.97□□□□□ -3.04
SNORA40.13-201ENST00000516379 NSD3Q9BZ95 1437 aa-3.97□□□□□ -3.05
SNORA40.13-201ENST00000516379 EVC2Q86UK5 1308 aa-3.97□□□□□ -3.05
SNORA40.13-201ENST00000516379 TRAV4A0A0B4J268 109 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 H0YAA0 97 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 FABP4P15090 132 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 TMBIM6P55061 237 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 MT1XP80297 61 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 Q5VV11 94 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 COX7B2Q8TF08 81 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 MSANTD3Q96H12 275 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 NCAPD3P42695 1498 aa-3.98□□□□□ -3.05
SNORA40.13-201ENST00000516379 LRBAP50851 2863 aa-3.99□□□□□ -3.05
SNORA40.13-201ENST00000516379 PIK3C2AO00443 1686 aa-3.99□□□□□ -3.05
SNORA40.13-201ENST00000516379 TCRBV3S1A0A5B6 114 aa-3.99□□□□□ -3.05
SNORA40.13-201ENST00000516379 CST8O60676 142 aa-3.99□□□□□ -3.05
SNORA40.13-201ENST00000516379 PET100P0DJ07 73 aa-3.99□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms