RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	FBLL1	A6NHQ2	334 aa	Known RBP	11.56	□□□□□ -0.56
MATR3-222	ENST00000513678	GNG5	P63218	68 aa		11.56	□□□□□ -0.56
MATR3-222	ENST00000513678	RPL7L1	Q6DKI1	246 aa	Known RBP	11.56	□□□□□ -0.56
MATR3-222	ENST00000513678	KCNS1	Q96KK3	526 aa		11.56	□□□□□ -0.56
MATR3-222	ENST00000513678	HHLA3	Q9XRX5	114 aa		11.56	□□□□□ -0.56
MATR3-222	ENST00000513678	FXYD6-FXYD2	A0A087WZ82	144 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678	IGHV3-16	A0A0C4DH30	117 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678		G3V3Q6	166 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678		K7EQM0	130 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678	CDK2AP2	O75956	126 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678	NDFIP1	Q9BT67	221 aa		11.55	□□□□□ -0.56
MATR3-222	ENST00000513678		A0A1W2PRE2	83 aa		11.54	□□□□□ -0.56
MATR3-222	ENST00000513678	GGTLC3	B5MD39	225 aa		11.54	□□□□□ -0.56
MATR3-222	ENST00000513678	IGHV3-53	P01767	116 aa		11.54	□□□□□ -0.56
MATR3-222	ENST00000513678	MRPL23	Q16540	153 aa	Known RBP	11.54	□□□□□ -0.56
MATR3-222	ENST00000513678	EPDR1	Q9UM22	224 aa		11.54	□□□□□ -0.56
MATR3-222	ENST00000513678	TRAV4	A0A0B4J268	109 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678		F6UZH7	168 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678		M0R2P5	195 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	TAAR5	O14804	337 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	IGLV2-11	P01706	119 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	SUMO1	P63165	101 aa	Known RBP	11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	CYB561D1	Q8N8Q1	229 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	TMEM75	Q8N9X5	138 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	ZNF479	Q96JC4	524 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	C8orf49	Q96NF6	230 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	KRTAP4-5	Q9BYR2	181 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	SDF2L1	Q9HCN8	221 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	NAGK	Q9UJ70	344 aa		11.53	□□□□□ -0.56
MATR3-222	ENST00000513678	CTXND1	A0A1B0GTU2	59 aa		11.52	□□□□□ -0.57
MATR3-222	ENST00000513678	GNRH2	O43555	120 aa		11.52	□□□□□ -0.57
MATR3-222	ENST00000513678	TYMS	P04818	313 aa		11.52	□□□□□ -0.57
MATR3-222	ENST00000513678	ZNF726P1	Q15940	193 aa		11.52	□□□□□ -0.57
MATR3-222	ENST00000513678	PSG8	Q9UQ74	426 aa		11.52	□□□□□ -0.57
MATR3-222	ENST00000513678	TRGV4	A0A0C4DH28	118 aa		11.51	□□□□□ -0.57
MATR3-222	ENST00000513678	ORM1	P02763	201 aa		11.51	□□□□□ -0.57
MATR3-222	ENST00000513678	FLI1	Q01543	452 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-222	ENST00000513678		Q6ZRN7	208 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-222	ENST00000513678	NEGR1	Q7Z3B1	354 aa		11.51	□□□□□ -0.57
MATR3-222	ENST00000513678	SIVA1	O15304	175 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	PFN1	P07737	140 aa	Known RBP	11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	SFTA3	P0C7M3	94 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	ZNF80	P51504	273 aa	Predicted RBP	11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	LINC00315	P59091	139 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	SAPCD1	Q5SSQ6	148 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	LYPD5	Q6UWN5	251 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	SPATA12	Q7Z6I5	190 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	PTH2	Q96A98	100 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	NKX6-2	Q9C056	277 aa	Predicted RBP	11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	CYTL1	Q9NRR1	136 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	C11orf21	Q9P2W6	132 aa		11.5	□□□□□ -0.57
MATR3-222	ENST00000513678	CIDEA	O60543	219 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	NXPH4	O95158	308 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	GCG	P01275	180 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	KRTAP10-2	P60368	255 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	ZFP69	Q49AA0	526 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	SMUG1	Q53HV7	270 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	OR4C5	Q8NGB2	326 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678	SGK494	Q96LW2	274 aa		11.49	□□□□□ -0.57
MATR3-222	ENST00000513678		K7EP13	123 aa		11.48	□□□□□ -0.57
MATR3-222	ENST00000513678		K7EQD1	137 aa		11.48	□□□□□ -0.57
MATR3-222	ENST00000513678	AKR1C8P	Q5T2L2	129 aa		11.48	□□□□□ -0.57
MATR3-222	ENST00000513678		C9JCJ5	164 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	ARPC5	O15511	151 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	SRI	P30626	198 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	ZNF345	Q14585	488 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	SH2D6	Q7Z4S9	175 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	PRNT	Q86SH4	94 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	PCNP	Q8WW12	178 aa	Known RBP	11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	HIST1H2BA	Q96A08	127 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	C9orf85	Q96MD7	179 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	TXNDC17	Q9BRA2	123 aa		11.47	□□□□□ -0.57
MATR3-222	ENST00000513678	FAM74A7	A6NL05	159 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	GYPE	P15421	78 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	GATA1	P15976	413 aa	Predicted RBP	11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	PPT1	P50897	306 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	TIRAP	P58753	221 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	COX8C	Q7Z4L0	72 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	TCEAL7	Q9BRU2	100 aa		11.46	□□□□□ -0.57
MATR3-222	ENST00000513678	ZNF876P	Q49A33	203 aa		11.45	□□□□□ -0.58
MATR3-222	ENST00000513678	PIK3CD-AS1	Q5SR53	167 aa		11.45	□□□□□ -0.58
MATR3-222	ENST00000513678	KCNRG	Q8N5I3	272 aa		11.45	□□□□□ -0.58
MATR3-222	ENST00000513678	MAP1LC3B2	A6NCE7	125 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	HMSD	A8MTL9	139 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	PEX7	O00628	323 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	RS1	O15537	224 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	IFNA7	P01567	189 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	FHIT	P49789	147 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	MAPKAPK5-AS1	Q8N8E1	139 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	LINC00479	Q96M42	142 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	MAP1LC3B	Q9GZQ8	125 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	ARL2-SNX15	V9GYD0	113 aa		11.44	□□□□□ -0.58
MATR3-222	ENST00000513678	FABP5P3	A8MUU1	101 aa		11.43	□□□□□ -0.58
MATR3-222	ENST00000513678	RNASE3	P12724	160 aa	Known RBP	11.43	□□□□□ -0.58
MATR3-222	ENST00000513678	CFAP126	Q5VTH2	177 aa		11.43	□□□□□ -0.58
MATR3-222	ENST00000513678		Q86TA4	180 aa		11.43	□□□□□ -0.58
MATR3-222	ENST00000513678	TRAV9-2	A0A087WT02	112 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	TRAV34	A0A0B4J273	112 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	IGKV3D-20	A0A0C4DH25	116 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	TRBV6-1	A0A0K0K1D8	114 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms