RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 USP9YO00507 2555 aaPredicted RBP8.91□□□□□ -0.98
TCOF1-211ENST00000513346 IGLV2-8P01709 118 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 PATE2Q6UY27 113 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 SPAG8Q99932 426 aaPredicted RBP8.91□□□□□ -0.98
TCOF1-211ENST00000513346 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 NPC2P61916 151 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 PMVKQ15126 192 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 DEFB104AQ8WTQ1 72 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 LINC00477Q96M19 166 aa8.91□□□□□ -0.98
TCOF1-211ENST00000513346 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.98
TCOF1-211ENST00000513346 STHQ8IWL8 128 aa8.9□□□□□ -0.98
TCOF1-211ENST00000513346 DUSP14O95147 198 aaKnown RBP8.9□□□□□ -0.98
TCOF1-211ENST00000513346 SAA4P35542 130 aa8.9□□□□□ -0.98
TCOF1-211ENST00000513346 C3orf36Q3SXR2 165 aa8.9□□□□□ -0.98
TCOF1-211ENST00000513346 C9orf139Q6ZV77 190 aa8.9□□□□□ -0.99
TCOF1-211ENST00000513346 TP53TG1Q9Y2A0 90 aa8.9□□□□□ -0.99
TCOF1-211ENST00000513346 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 SRD5A1P18405 259 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 NSUN5P1Q3KNT7 163 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 MORN3Q6PF18 240 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 C11orf53Q8IXP5 236 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 IGKV1OR2-108A0A075B7D4 117 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 TRAV26-2A0A0B4J265 109 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 A0A0U1RRA0 63 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 GATA4P43694 442 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 LINC01356Q8N9X3 169 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 K7EMI3 77 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 IGFL2Q6UWQ7 119 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 ATP6V0E2Q8NHE4 81 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 TIMM21Q9BVV7 248 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 LAMA2P24043 3122 aaKnown RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 ADAMTS9Q9P2N4 1935 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RBMY1BA6NDE4 496 aaKnown RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RBMY1EA6NEQ0 496 aaKnown RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RNF223E7ERA6 249 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RBMY1DP0C7P1 496 aaKnown RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
TCOF1-211ENST00000513346 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 GP9P14770 177 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 LINC00310P59036 64 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 ZNF503Q96F45 646 aa8.89□□□□□ -0.99
TCOF1-211ENST00000513346 LGALS1P09382 135 aaKnown RBP8.88□□□□□ -0.99
TCOF1-211ENST00000513346 ZNF876PQ49A33 203 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 MBD6Q96DN6 1003 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 HTN3P15516 51 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 IL17RELQ6ZVW7 336 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 C17orf77Q96MU5 243 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 PCNX3Q9H6A9 2034 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 MSMBP08118 114 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 EGR2P11161 476 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-211ENST00000513346 GATA3P23771 443 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 TPSG1Q9NRR2 321 aa8.88□□□□□ -0.99
TCOF1-211ENST00000513346 C19orf71A6NCJ1 209 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 IGLV1-44P01699 117 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 DUX4L9Q6RFH8 374 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-211ENST00000513346 Q8TCH9 128 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 SPXQ9BT56 116 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 LINC00311Q8N616 119 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 CFC1P0CG37 223 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 USP9XQ93008 2570 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-211ENST00000513346 TNRC6AQ8NDV7 1962 aaKnown RBP8.87□□□□□ -0.99
TCOF1-211ENST00000513346 Q8N976 141 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-211ENST00000513346 TOMM7Q9P0U1 55 aa8.87□□□□□ -0.99
TCOF1-211ENST00000513346 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 WNK1Q9H4A3 2382 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 EML6Q6ZMW3 1958 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 A0A1W2PNU3 283 aaPredicted RBP8.86□□□□□ -0.99
TCOF1-211ENST00000513346 J3QQQ9 107 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 RNF183Q96D59 192 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 C5orf42Q9H799 3197 aa8.86□□□□□ -0.99
TCOF1-211ENST00000513346 IGLV3-9A0A075B6K5 115 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 ODF1Q14990 250 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 LY6G5BQ8NDX9 201 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 INAFM2P0DMQ5 153 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 GATA1P15976 413 aaPredicted RBP8.85□□□□□ -0.99
TCOF1-211ENST00000513346 UBE2E1P51965 193 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
TCOF1-211ENST00000513346 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 BRWD1-AS2P59051 145 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 USMG5Q96IX5 58 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
TCOF1-211ENST00000513346 E9PLD3 99 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 CHD7Q9P2D1 2997 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 RUSC1-AS1Q66K80 236 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 Q6ZUT4 128 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 ABCA12Q86UK0 2595 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 KIAA1549LQ6ZVL6 1849 aa8.84□□□□□ -0.99
TCOF1-211ENST00000513346 LOXP28300 417 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms