RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 XIRP1Q702N8 1843 aaKnown RBP0.14□□□□□ -2.39
SMN1-208ENST00000513228 CPDO75976 1380 aa0.14□□□□□ -2.39
SMN1-208ENST00000513228 ZCCHC6Q5VYS8 1495 aaKnown RBP0.14□□□□□ -2.39
SMN1-208ENST00000513228 CDK12Q9NYV4 1490 aaPredicted RBP0.14□□□□□ -2.39
SMN1-208ENST00000513228 KDM5CP41229 1560 aa0.14□□□□□ -2.39
SMN1-208ENST00000513228 KIDINS220Q9ULH0 1771 aa0.14□□□□□ -2.39
SMN1-208ENST00000513228 ARHGAP31Q2M1Z3 1444 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 MYH1P12882 1939 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 IGHV1-24A0A0C4DH33 117 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 HIGD1CA8MV81 97 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 H0YJX3 145 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 J3KT08 172 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 NBEAP1P0C6P0 100 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 ADCYAP1P18509 176 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 CKS2P33552 79 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 B2MP61769 119 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 SPINK13Q1W4C9 94 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 TMEM35BQ8NCS4 154 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 ARAP1Q96P48 1450 aa0.13□□□□□ -2.39
SMN1-208ENST00000513228 PTPRZ1P23471 2315 aaPredicted RBP0.13□□□□□ -2.39
SMN1-208ENST00000513228 RREB1Q92766 1687 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 A0A0G2JMM0 328 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 FXYD1O00168 92 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 MT-ND4LP03901 98 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 CD3DP04234 171 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 SDC4P31431 198 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 PCBD1P61457 104 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 RPS28P62857 69 aaKnown RBP0.12□□□□□ -2.39
SMN1-208ENST00000513228 OR8B8Q15620 311 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 RHOHQ15669 191 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 IQCJQ1A5X6 159 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 IDO2Q6ZQW0 420 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 OR4S1Q8NGB4 309 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 DMAC1Q96GE9 116 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 METTL1Q9UBP6 276 aaKnown RBP0.12□□□□□ -2.39
SMN1-208ENST00000513228 GINS2Q9Y248 185 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 ATG2AQ2TAZ0 1938 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 AFDNP55196 1824 aaKnown RBP0.12□□□□□ -2.39
SMN1-208ENST00000513228 FAT4Q6V0I7 4981 aa0.12□□□□□ -2.39
SMN1-208ENST00000513228 DLEC1Q9Y238 1755 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 TRAV36DV7A0A075B6V5 113 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 A0A1B0GW64 132 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 A0A1B0GX51 115 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 GNG14A0A1W2PPG7 69 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 TSTD3H0UI37 97 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 DPM2O94777 84 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 LSM3P62310 102 aaKnown RBP0.11□□□□□ -2.39
SMN1-208ENST00000513228 HSD17B12Q53GQ0 312 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 OR8I2Q8N0Y5 310 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 SKA2Q8WVK7 121 aaPredicted RBP0.11□□□□□ -2.39
SMN1-208ENST00000513228 ATG5Q9H1Y0 275 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 MRPL40Q9NQ50 206 aaKnown RBP0.11□□□□□ -2.39
SMN1-208ENST00000513228 DNAJC15Q9Y5T4 150 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 TNCP24821 2201 aa0.11□□□□□ -2.39
SMN1-208ENST00000513228 BLMP54132 1417 aaPredicted RBP0.11□□□□□ -2.39
SMN1-208ENST00000513228 KNTC1P50748 2209 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 RBBP6Q7Z6E9 1792 aaKnown RBP0.1□□□□□ -2.39
SMN1-208ENST00000513228 A0A096LNT2 108 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 CXorf51AA0A1B0GTR3 108 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 TNFSF15O95150 251 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 TFF1P04155 84 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 CCKP06307 115 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 PAEPP09466 180 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 PSPHP78330 225 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 KLKP1Q107X0 134 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 TMEM91Q6ZNR0 172 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 TAC4Q86UU9 113 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 TSKUQ8WUA8 353 aa0.1□□□□□ -2.39
SMN1-208ENST00000513228 DMBT1Q9UGM3 2413 aaPredicted RBP0.1□□□□□ -2.39
SMN1-208ENST00000513228 HELZP42694 1942 aaKnown RBP0.1□□□□□ -2.39
SMN1-208ENST00000513228 ASH1LQ9NR48 2969 aaKnown RBP0.1□□□□□ -2.39
SMN1-208ENST00000513228 MEGF8Q7Z7M0 2845 aa0.09□□□□□ -2.39
SMN1-208ENST00000513228 TRBV10-1A0A0K0K1A3 114 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 PNMA8CA0A1B0GUJ8 204 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 C9JAW5 83 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 DEGS1O15121 323 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 SCTP09683 121 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
SMN1-208ENST00000513228 POLR2JP52435 117 aaKnown RBP0.09□□□□□ -2.4
SMN1-208ENST00000513228 TMEM244Q5VVB8 128 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 UNQ5815/PRO19632Q6UWF5 114 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 SLC35B3Q9H1N7 401 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 BANF2Q9H503 90 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 TMEM14BQ9NUH8 114 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 HIGD1AQ9Y241 93 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 HSPB11Q9Y547 144 aa0.09□□□□□ -2.4
SMN1-208ENST00000513228 MAP2P11137 1827 aaKnown RBP0.08□□□□□ -2.4
SMN1-208ENST00000513228 PLXNA2O75051 1894 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 TANC1Q9C0D5 1861 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 TRAV17A0A0B4J275 112 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 OR2H2O95918 312 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 MPC1LP0DKB6 136 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 HLA-DRB4P13762 266 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 AKR1D1P51857 326 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 SLC25A26Q70HW3 274 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 CALML5Q9NZT1 146 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 HLA-DRB4X5D2U9 266 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 NINQ8N4C6 2090 aa0.08□□□□□ -2.4
SMN1-208ENST00000513228 CASZ1Q86V15 1759 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms