RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 FAM162BQ5T6X4 162 aa9.09□□□□□ -0.95
CDK7-209ENST00000512985 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
CDK7-209ENST00000512985 TMEM183AQ8IXX5 376 aa9.09□□□□□ -0.95
CDK7-209ENST00000512985 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
CDK7-209ENST00000512985 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CDK7-209ENST00000512985 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
CDK7-209ENST00000512985 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
CDK7-209ENST00000512985 C11orf52Q96A22 123 aa9.08□□□□□ -0.96
CDK7-209ENST00000512985 BIN3Q9NQY0 253 aa9.08□□□□□ -0.96
CDK7-209ENST00000512985 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
CDK7-209ENST00000512985 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 GAGE12BA1L429 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 F5H768 121 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 SPINK4O60575 86 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 GAGE7O76087 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
CDK7-209ENST00000512985 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 SMIM12Q96EX1 92 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
CDK7-209ENST00000512985 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
CDK7-209ENST00000512985 ORM1P02763 201 aa9.06□□□□□ -0.96
CDK7-209ENST00000512985 TYMSP04818 313 aa9.06□□□□□ -0.96
CDK7-209ENST00000512985 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
CDK7-209ENST00000512985 ZNF80P51504 273 aaPredicted RBP9.06□□□□□ -0.96
CDK7-209ENST00000512985 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
CDK7-209ENST00000512985 MED9Q9NWA0 146 aa9.06□□□□□ -0.96
CDK7-209ENST00000512985 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 B4DEV8 164 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 M0R2P5 195 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 ASIPP42127 132 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 GNG4P50150 75 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 SLAQ13239 276 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 Q6ZQT7 251 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 Q6ZTI0 123 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 DAZAP1Q96EP5 407 aaKnown RBP9.05□□□□□ -0.96
CDK7-209ENST00000512985 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
CDK7-209ENST00000512985 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
CDK7-209ENST00000512985 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 LCE6AA0A183 80 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 GNRH2O43555 120 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 SH2D1AO60880 128 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
CDK7-209ENST00000512985 ZNF674Q2M3X9 581 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 RASL10AQ92737 203 aa9.04□□□□□ -0.96
CDK7-209ENST00000512985 CIDEAO60543 219 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 RAB14P61106 215 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 OR5I1Q13606 314 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 ZNF506Q5JVG8 444 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 LGALS9CQ6DKI2 356 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
CDK7-209ENST00000512985 MRPL16Q9NX20 251 aaKnown RBP9.03□□□□□ -0.96
CDK7-209ENST00000512985 LY6G6CO95867 125 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 P0DMU3 169 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 MGST1P10620 155 aaKnown RBP9.02□□□□□ -0.97
CDK7-209ENST00000512985 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 TMEM88Q6PEY1 159 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 NHLRC2Q8NBF2 726 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 SYT8Q8NBV8 401 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 FAM210AQ96ND0 272 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 APLNQ9ULZ1 77 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
CDK7-209ENST00000512985 XKRY2A2RUG3 117 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 KRBOX1C9JBD0 128 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 H3BNG1 76 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 M0R036 132 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 CXCL1P09341 107 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 TOR2AQ5JU69 321 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 OR4C5Q8NGB2 326 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 PTH2Q96A98 100 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 DERL1Q9BUN8 251 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
CDK7-209ENST00000512985 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
CDK7-209ENST00000512985 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
CDK7-209ENST00000512985 TRGV4A0A0C4DH28 118 aa9□□□□□ -0.97
CDK7-209ENST00000512985 C9JCJ5 164 aa9□□□□□ -0.97
CDK7-209ENST00000512985 CRIP1P50238 77 aa9□□□□□ -0.97
CDK7-209ENST00000512985 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
CDK7-209ENST00000512985 DNLZQ5SXM8 178 aa9□□□□□ -0.97
CDK7-209ENST00000512985 C9orf85Q96MD7 179 aa9□□□□□ -0.97
CDK7-209ENST00000512985 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
CDK7-209ENST00000512985 CEBPGP53567 150 aa8.99□□□□□ -0.97
CDK7-209ENST00000512985 PEA15Q15121 130 aa8.99□□□□□ -0.97
CDK7-209ENST00000512985 PARLQ9H300 379 aa8.99□□□□□ -0.97
CDK7-209ENST00000512985 PRO0255Q9UI72 69 aa8.99□□□□□ -0.97
CDK7-209ENST00000512985 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms