RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 ZNF479Q96JC4 524 aa15.8■□□□□ 0.12
SNF8-209ENST00000510558 NDFIP1Q9BT67 221 aa15.8■□□□□ 0.12
SNF8-209ENST00000510558 IGHV3-16A0A0C4DH30 117 aa15.79■□□□□ 0.12
SNF8-209ENST00000510558 TYMSP04818 313 aa15.79■□□□□ 0.12
SNF8-209ENST00000510558 RGS21Q2M5E4 152 aa15.79■□□□□ 0.12
SNF8-209ENST00000510558 SDF2L1Q9HCN8 221 aa15.79■□□□□ 0.12
SNF8-209ENST00000510558 GGTLC3B5MD39 225 aa15.78■□□□□ 0.12
SNF8-209ENST00000510558 K7EQM0 130 aa15.78■□□□□ 0.12
SNF8-209ENST00000510558 SUMO1P63165 101 aaKnown RBP15.78■□□□□ 0.12
SNF8-209ENST00000510558 MRPL23Q16540 153 aaKnown RBP15.78■□□□□ 0.12
SNF8-209ENST00000510558 IQCF2Q8IXL9 164 aa15.78■□□□□ 0.12
SNF8-209ENST00000510558 M0R2P5 195 aa15.77■□□□□ 0.12
SNF8-209ENST00000510558 KCNS1Q96KK3 526 aa15.77■□□□□ 0.12
SNF8-209ENST00000510558 EPDR1Q9UM22 224 aa15.77■□□□□ 0.12
SNF8-209ENST00000510558 PSG8Q9UQ74 426 aa15.77■□□□□ 0.12
SNF8-209ENST00000510558 TRAV4A0A0B4J268 109 aa15.76■□□□□ 0.11
SNF8-209ENST00000510558 G3V3Q6 166 aa15.76■□□□□ 0.11
SNF8-209ENST00000510558 SIVA1O15304 175 aa15.76■□□□□ 0.11
SNF8-209ENST00000510558 NXPH4O95158 308 aa15.76■□□□□ 0.11
SNF8-209ENST00000510558 IGLV2-11P01706 119 aa15.75■□□□□ 0.11
SNF8-209ENST00000510558 ZNF80P51504 273 aaPredicted RBP15.75■□□□□ 0.11
SNF8-209ENST00000510558 ZNF726P1Q15940 193 aa15.75■□□□□ 0.11
SNF8-209ENST00000510558 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
SNF8-209ENST00000510558 CYB561D1Q8N8Q1 229 aa15.75■□□□□ 0.11
SNF8-209ENST00000510558 CTXND1A0A1B0GTU2 59 aa15.74■□□□□ 0.11
SNF8-209ENST00000510558 BTF3P20290 206 aaKnown RBP15.74■□□□□ 0.11
SNF8-209ENST00000510558 FLI1Q01543 452 aaPredicted RBP15.74■□□□□ 0.11
SNF8-209ENST00000510558 LYPD5Q6UWN5 251 aa15.74■□□□□ 0.11
SNF8-209ENST00000510558 TMEM75Q8N9X5 138 aa15.74■□□□□ 0.11
SNF8-209ENST00000510558 OR4C5Q8NGB2 326 aa15.74■□□□□ 0.11
SNF8-209ENST00000510558 KRTAP17-1Q9BYP8 105 aa15.74■□□□□ 0.11
SNF8-209ENST00000510558 A0A1W2PRE2 83 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 K7EQD1 137 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 GCGP01275 180 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 GYPEP15421 78 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 PRNTQ86SH4 94 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 PCNPQ8WW12 178 aaKnown RBP15.73■□□□□ 0.11
SNF8-209ENST00000510558 C11orf21Q9P2W6 132 aa15.73■□□□□ 0.11
SNF8-209ENST00000510558 C16orf90A8MZG2 172 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 TAAR5O14804 337 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 ORM1P02763 201 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 SRIP30626 198 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 ZFP69Q49AA0 526 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 SMUG1Q53HV7 270 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 AKR1C8PQ5T2L2 129 aa15.72■□□□□ 0.11
SNF8-209ENST00000510558 FBLL1A6NHQ2 334 aaKnown RBP15.71■□□□□ 0.11
SNF8-209ENST00000510558 ARPC5O15511 151 aa15.71■□□□□ 0.11
SNF8-209ENST00000510558 PFN1P07737 140 aaKnown RBP15.71■□□□□ 0.11
SNF8-209ENST00000510558 LINC00315P59091 139 aa15.71■□□□□ 0.11
SNF8-209ENST00000510558 C9JCJ5 164 aa15.7■□□□□ 0.1
SNF8-209ENST00000510558 IFNA7P01567 189 aa15.69■□□□□ 0.1
SNF8-209ENST00000510558 FGF8P55075 233 aaPredicted RBP15.69■□□□□ 0.1
SNF8-209ENST00000510558 UBE2G2P60604 165 aa15.69■□□□□ 0.1
SNF8-209ENST00000510558 SAPCD1Q5SSQ6 148 aa15.69■□□□□ 0.1
SNF8-209ENST00000510558 LINC00479Q96M42 142 aa15.69■□□□□ 0.1
SNF8-209ENST00000510558 CYTL1Q9NRR1 136 aa15.69■□□□□ 0.1
SNF8-209ENST00000510558 TRAV34A0A0B4J273 112 aa15.68■□□□□ 0.1
SNF8-209ENST00000510558 ZNF876PQ49A33 203 aa15.68■□□□□ 0.1
SNF8-209ENST00000510558 TXNDC17Q9BRA2 123 aa15.68■□□□□ 0.1
SNF8-209ENST00000510558 LOC100131303A0A0U1RQF7 123 aa15.67■□□□□ 0.1
SNF8-209ENST00000510558 SMLR1H3BR10 107 aa15.67■□□□□ 0.1
SNF8-209ENST00000510558 GATA1P15976 413 aaPredicted RBP15.67■□□□□ 0.1
SNF8-209ENST00000510558 SPATA12Q7Z6I5 190 aa15.67■□□□□ 0.1
SNF8-209ENST00000510558 C9orf85Q96MD7 179 aa15.67■□□□□ 0.1
SNF8-209ENST00000510558 FAM74A7A6NL05 159 aa15.66■□□□□ 0.1
SNF8-209ENST00000510558 PEX7O00628 323 aa15.66■□□□□ 0.1
SNF8-209ENST00000510558 PPT1P50897 306 aa15.66■□□□□ 0.1
SNF8-209ENST00000510558 Q6ZRN7 208 aaPredicted RBP15.66■□□□□ 0.1
SNF8-209ENST00000510558 ARL2-SNX15V9GYD0 113 aa15.66■□□□□ 0.1
SNF8-209ENST00000510558 MAP1LC3B2A6NCE7 125 aa15.65■□□□□ 0.1
SNF8-209ENST00000510558 DPPA3Q6W0C5 159 aa15.65■□□□□ 0.1
SNF8-209ENST00000510558 WFDC10BQ8IUB3 73 aa15.65■□□□□ 0.1
SNF8-209ENST00000510558 NKX6-2Q9C056 277 aaPredicted RBP15.65■□□□□ 0.1
SNF8-209ENST00000510558 MAP1LC3BQ9GZQ8 125 aa15.65■□□□□ 0.1
SNF8-209ENST00000510558 RS1O15537 224 aa15.64■□□□□ 0.09
SNF8-209ENST00000510558 CFAP126Q5VTH2 177 aa15.64■□□□□ 0.09
SNF8-209ENST00000510558 Q86TA4 180 aa15.64■□□□□ 0.09
SNF8-209ENST00000510558 LY96Q9Y6Y9 160 aa15.64■□□□□ 0.09
SNF8-209ENST00000510558 RYR1P21817 5038 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 PGPEP1LA6NFU8 196 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 RNASE3P12724 160 aaKnown RBP15.63■□□□□ 0.09
SNF8-209ENST00000510558 ZNF506Q5JVG8 444 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 SH2D6Q7Z4S9 175 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 NHLRC2Q8NBF2 726 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 HIST1H2BAQ96A08 127 aa15.63■□□□□ 0.09
SNF8-209ENST00000510558 TRAV9-2A0A087WT02 112 aa15.62■□□□□ 0.09
SNF8-209ENST00000510558 IGKV3D-20A0A0C4DH25 116 aa15.62■□□□□ 0.09
SNF8-209ENST00000510558 CIDEAO60543 219 aa15.62■□□□□ 0.09
SNF8-209ENST00000510558 PTH2Q96A98 100 aa15.62■□□□□ 0.09
SNF8-209ENST00000510558 TNFRSF18Q9Y5U5 241 aa15.62■□□□□ 0.09
SNF8-209ENST00000510558 LRP1BQ9NZR2 4599 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 FABP5P3A8MUU1 101 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 KRTAP10-2P60368 255 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 ZNF345Q14585 488 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 KCNRGQ8N5I3 272 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 SLC25A29Q8N8R3 303 aa15.61■□□□□ 0.09
SNF8-209ENST00000510558 IGHV3-73A0A0B4J1V6 119 aa15.6■□□□□ 0.09
SNF8-209ENST00000510558 RHOHQ15669 191 aa15.6■□□□□ 0.09
SNF8-209ENST00000510558 STOML3Q8TAV4 291 aa15.6■□□□□ 0.09
SNF8-209ENST00000510558 PRADC1Q9BSG0 188 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms