RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SPXQ9BT56 116 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 NOP10Q9NPE3 64 aaKnown RBP6.53□□□□□ -1.36
NUP54-207ENST00000508583 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
NUP54-207ENST00000508583 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 NDUFS6O75380 124 aaKnown RBP6.52□□□□□ -1.37
NUP54-207ENST00000508583 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 CCL20P78556 96 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 MUC21Q5SSG8 566 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 TEX261Q6UWH6 196 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 BAGE2Q86Y30 109 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 TVP23CQ96ET8 276 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 C8orf49Q96NF6 230 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 GSN-AS1Q9NRJ2 163 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
NUP54-207ENST00000508583 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 TRGV1A0A0A0MS02 117 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 RBFOX3A6NFN3 312 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 PRM2P04554 102 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 ATP5G1P05496 136 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 RPL35P42766 123 aaKnown RBP6.51□□□□□ -1.37
NUP54-207ENST00000508583 C18orf15Q96N68 181 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
NUP54-207ENST00000508583 TMEM250H0YL14 139 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 S100A4P26447 101 aaKnown RBP6.5□□□□□ -1.37
NUP54-207ENST00000508583 ASIPP42127 132 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 GNG4P50150 75 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 RAB14P61106 215 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 ZNF767PQ75MW2 155 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 LINC00612Q8N6U2 182 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 EIF5A2Q9GZV4 153 aaKnown RBP6.5□□□□□ -1.37
NUP54-207ENST00000508583 MED9Q9NWA0 146 aa6.5□□□□□ -1.37
NUP54-207ENST00000508583 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 B4DEV8 164 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 IGLL5B9A064 214 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 M0R2P5 195 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 SPINK4O60575 86 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 GAGE7O76087 117 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 ORM1P02763 201 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 TYMSP04818 313 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 HTN3P15516 51 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
NUP54-207ENST00000508583 SLAQ13239 276 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 ZNF674Q2M3X9 581 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 ZNF506Q5JVG8 444 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 ZC2HC1AQ96GY0 325 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 SMDT1Q9H4I9 107 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
NUP54-207ENST00000508583 IGHV4-4A0A075B6R2 117 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 IGHV3-16A0A0C4DH30 117 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 F5H768 121 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 CIDEAO60543 219 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 SH2D1AO60880 128 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 OR5I1Q13606 314 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 CENPWQ5EE01 88 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 TOR2AQ5JU69 321 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 Q6ZQT7 251 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 Q6ZTI0 123 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 RASL10AQ92737 203 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 DAZAP1Q96EP5 407 aaKnown RBP6.48□□□□□ -1.37
NUP54-207ENST00000508583 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 MLST8Q9BVC4 326 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 STARD9Q9P2P6 4700 aa6.48□□□□□ -1.37
NUP54-207ENST00000508583 C9JCJ5 164 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 GNRH2O43555 120 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 CXCL1P09341 107 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 MGST1P10620 155 aaKnown RBP6.47□□□□□ -1.37
NUP54-207ENST00000508583 PEA15Q15121 130 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 LINC01559Q495D7 138 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 NHLRC2Q8NBF2 726 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
NUP54-207ENST00000508583 TRAV4A0A0B4J268 109 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 KRBOX1C9JBD0 128 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 H3BNG1 76 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 M0R036 132 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 P0DMU3 169 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 FAM231AP0DMU4 169 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 FAM231CP0DMU5 169 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 MED14OSP0DP75 135 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 RPS20P60866 119 aaKnown RBP6.46□□□□□ -1.38
NUP54-207ENST00000508583 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 DNLZQ5SXM8 178 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 PTH2Q96A98 100 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 C9orf85Q96MD7 179 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 DERL1Q9BUN8 251 aa6.46□□□□□ -1.38
NUP54-207ENST00000508583 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms