RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TTTY10Q9BZA0 68 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 KIAA1549LQ6ZVL6 1849 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 TRIOBPQ9H2D6 2365 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 MYO7AQ13402 2215 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 DSCAML1Q8TD84 2053 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 C7orf77A4D0Y5 90 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 SRRM5B3KS81 715 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 C19orf84I3L1E1 186 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 CISD3P0C7P0 127 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 DPTQ07507 201 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 HEATR5BQ9P2D3 2071 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 NUMA1Q14980 2115 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 IGKCP01834 107 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 CCL4P13236 92 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 NPPCP23582 126 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 COL8A2P25067 703 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 ZFAND2AQ8N6M9 145 aa5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 GOLGA4Q13439 2230 aaKnown RBP5.29□□□□□ -1.56
PDGFRA-206ENST00000508170 UNC80Q8N2C7 3258 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 REV3LO60673 3130 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 IGLV3-9A0A075B6K5 115 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 IGKV3D-20A0A0C4DH25 116 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 hADV29S1A0JD25 119 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 ZNF688P0C7X2 276 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 RPL27AP46776 148 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 WFDC2Q14508 124 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 Q8NBF4 154 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 PPDPFLQ8WWR9 84 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 TMEM242Q9NWH2 141 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 TCF20Q9UGU0 1960 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 XIRP2A4UGR9 3374 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 UBE2L5PA0A1B0GUS4 154 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 C3orf84H3BNL1 204 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 LINC01547P58512 204 aaPredicted RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 NANOS3P60323 173 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 UBE2L3P68036 154 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 ZNF345Q14585 488 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 FAM216BQ8N7L0 139 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 TAS2R4Q9NYW5 299 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 CHD9Q3L8U1 2897 aa5.28□□□□□ -1.56
PDGFRA-206ENST00000508170 CCL3P10147 92 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 SSR2P43308 183 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 FUT5Q11128 374 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 C2orf83Q53S99 150 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 COX14Q96I36 57 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 PTPRSQ13332 1948 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 HCFC1P51610 2035 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 ARHGEF17Q96PE2 2063 aaPredicted RBP5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 MUC21A0A140T8X8 626 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 LCE2BO14633 110 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV3-7P01780 117 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 SFTA3P0C7M3 94 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 ZFP2Q6ZN57 461 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 AMN1Q8IY45 258 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 CLEC2BQ92478 149 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 C11orf1Q9H5F2 150 aa5.27□□□□□ -1.57
PDGFRA-206ENST00000508170 GON4LQ3T8J9 2241 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 A6NN06 94 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 C15orf53Q8NAA6 179 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 SCGB3A1Q96QR1 104 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 TRPM6Q9BX84 2022 aa5.26□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV7-4-1A0A0J9YVY3 117 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 SIGLECL1Q8N7X8 197 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 PPP1R1CQ8WVI7 109 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 SCRT2Q9NQ03 307 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 C5orf42Q9H799 3197 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 H3BUT2 72 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 NUPR1O60356 82 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 PROP1O75360 226 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 HIST1H4AP62805 103 aaKnown RBP5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 FAM78AQ5JUQ0 283 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 Q8N8P6 123 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 GTSF1Q8WW33 167 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 CMC2Q9NRP2 79 aa5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 MUC22E2RYF6 1773 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-206ENST00000508170 PIN1P1O15428 100 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 CKS2P33552 79 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 Q6ZQT7 251 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 C20orf203Q8NBC4 194 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 SPTSSAQ969W0 71 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 MUCL1Q96DR8 90 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 C8orf49Q96NF6 230 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 DOCK9Q9BZ29 2069 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 PCNX3Q9H6A9 2034 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 UNC79Q9P2D8 2635 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 SNRNP200O75643 2136 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 VCANP13611 3396 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 K7EM74 188 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms