RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PRNTQ86SH4 94 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 EIF5A2Q9GZV4 153 aaKnown RBP6.08□□□□□ -1.44
PDGFC-205ENST00000506880 RPH3ALQ9UNE2 315 aa6.08□□□□□ -1.44
PDGFC-205ENST00000506880 TRAV12-2A0A075B6T6 113 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 TRAV8-1A0A0A6YYK1 113 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 TRAV10A0A0B4J240 114 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 SCO2A0A1W2PP80 73 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 CBY3A6NI87 242 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 GCGP01275 180 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 RBMY1A1P0DJD3 496 aaKnown RBP6.07□□□□□ -1.44
PDGFC-205ENST00000506880 RBMY1CP0DJD4 496 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 BTN1A1Q13410 526 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 RBMY1FQ15415 496 aaKnown RBP6.07□□□□□ -1.44
PDGFC-205ENST00000506880 UQCC3Q6UW78 93 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 Q8TAT8 98 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 RASL10AQ92737 203 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 TVP23CQ96ET8 276 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 IL36BQ9NZH7 164 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
PDGFC-205ENST00000506880 PLAC8L1A1L4L8 177 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 FAM231BA6NCW3 169 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 M0R2P5 195 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 FXYD7P58549 80 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 CT83Q5H943 113 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 WDR73Q6P4I2 378 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 DAZAP1Q96EP5 407 aaKnown RBP6.06□□□□□ -1.44
PDGFC-205ENST00000506880 RETNQ9HD89 108 aa6.06□□□□□ -1.44
PDGFC-205ENST00000506880 IGHV3OR16-12A0A075B7B8 117 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 A0A1W2PPQ1 181 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 ZNF705GA8MUZ8 300 aaPredicted RBP6.05□□□□□ -1.44
PDGFC-205ENST00000506880 F2Z2F3 143 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 SPINK4O60575 86 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 EIF3GO75821 320 aaKnown RBP eCLIP6.05□□□□□ -1.44
PDGFC-205ENST00000506880 ATP5G1P05496 136 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 DAD1P61803 113 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 FAM222AQ5U5X8 452 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 FAM231DQ6ZW35 169 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 C15orf53Q8NAA6 179 aa6.05□□□□□ -1.44
PDGFC-205ENST00000506880 TRAV34A0A0B4J273 112 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 IGHV3-16A0A0C4DH30 117 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 A0A1B0GV50 99 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 B4DEV8 164 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 OR5AL1P0C617 328 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 ASIPP42127 132 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 PNRC1Q12796 327 aaPredicted RBP6.04□□□□□ -1.44
PDGFC-205ENST00000506880 CENPWQ5EE01 88 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 TOR2AQ5JU69 321 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 PRR9Q5T870 116 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
PDGFC-205ENST00000506880 SH2D6Q7Z4S9 175 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 SYT8Q8NBV8 401 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 ZC2HC1AQ96GY0 325 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 LINC00479Q96M42 142 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 PARLQ9H300 379 aa6.04□□□□□ -1.44
PDGFC-205ENST00000506880 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 C19orf71A6NCJ1 209 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 A8MWV9 139 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 KRBOX1C9JBD0 128 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 RHODO00212 210 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 SH2D1AO60880 128 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 P01737 135 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 TYMSP04818 313 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 SRP19P09132 144 aaKnown RBP6.03□□□□□ -1.44
PDGFC-205ENST00000506880 S100A4P26447 101 aaKnown RBP6.03□□□□□ -1.44
PDGFC-205ENST00000506880 FAM3BP58499 235 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-205ENST00000506880 KIR3DS1Q14943 382 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 ZFP2Q6ZN57 461 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 PHLDA1Q8WV24 401 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-205ENST00000506880 C8orf49Q96NF6 230 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 SMIM7Q9BQ49 75 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-205ENST00000506880 GFRA4Q9GZZ7 299 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 SCRT2Q9NQ03 307 aa6.03□□□□□ -1.44
PDGFC-205ENST00000506880 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 SNAI2O43623 268 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 ORM1P02763 201 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 AZU1P20160 251 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
PDGFC-205ENST00000506880 ZNF80P51504 273 aaPredicted RBP6.02□□□□□ -1.45
PDGFC-205ENST00000506880 CACNG7P62955 275 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 TMEM241Q24JQ0 296 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 C12orf74Q32Q52 190 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 SOHLH1Q5JUK2 328 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 CASC10Q5T4H9 136 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 ZFP82Q8N141 532 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 FRZBQ92765 325 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 NOP10Q9NPE3 64 aaKnown RBP6.02□□□□□ -1.45
PDGFC-205ENST00000506880 OSTCQ9NRP0 149 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 NAT8Q9UHE5 227 aa6.02□□□□□ -1.45
PDGFC-205ENST00000506880 TRBV20OR9-2A0A075B6H5 130 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 IGHV4-4A0A075B6R2 117 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 DEFB131BA0A096LNP1 70 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 IGKV3D-20A0A0C4DH25 116 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 PGPEP1LA6NFU8 196 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 A8MWL6 223 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 J3KRW8 73 aa6.01□□□□□ -1.45
PDGFC-205ENST00000506880 PPP1R2P9O14990 202 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms