RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 GEMIN2O14893 280 aaKnown RBP1.92□□□□□ -2.1
HERC3-209ENST00000504994 DLEU1O43261 78 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 YPEL1O60688 119 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 GDF5OSQ5U4N7 250 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 MIC13Q5XKP0 118 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 ATP11AUNQ6ZP68 121 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 IDO2Q6ZQW0 420 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 SLC25A26Q70HW3 274 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 ATP6V0E2Q8NHE4 81 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 WFDC10AQ9H1F0 79 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 SAR1AQ9NR31 198 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 NOP16Q9Y3C1 178 aaKnown RBP1.92□□□□□ -2.1
HERC3-209ENST00000504994 CASZ1Q86V15 1759 aa1.92□□□□□ -2.1
HERC3-209ENST00000504994 IGKV3-7A0A075B6H7 116 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 A0A0J9YY99 117 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 JMJD7-PLA2G4BH0Y9G9 81 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 C3orf62Q6ZUJ4 267 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 TMEM191AQ9H0A3 160 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 ERBINQ96RT1 1412 aa1.91□□□□□ -2.1
HERC3-209ENST00000504994 ROCK2O75116 1388 aaKnown RBP1.9□□□□□ -2.11
HERC3-209ENST00000504994 FAM25AB3EWG3 89 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 FAM25CB3EWG5 89 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 FAM25GB3EWG6 89 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 IGLV3-1P01715 115 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 PYYP10082 97 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 Q6ZUT4 128 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 ATOH7Q8N100 152 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 LRP5O75197 1615 aa1.9□□□□□ -2.11
HERC3-209ENST00000504994 GRIN2AQ12879 1464 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 IGKCP01834 107 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 PRB4P10163 310 aaPredicted RBP1.89□□□□□ -2.11
HERC3-209ENST00000504994 IL7P13232 177 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 SPCS2Q15005 226 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 RHOHQ15669 191 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 DPH3Q96FX2 82 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 PTPRGP23470 1445 aa1.89□□□□□ -2.11
HERC3-209ENST00000504994 UHRF1BP1LA0JNW5 1464 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 TRAV23DV6A0A075B6W5 121 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 IGKV2-40A0A087WW87 121 aaPredicted RBP1.88□□□□□ -2.11
HERC3-209ENST00000504994 IGF2P01344 180 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 IGKV2D-40P01614 121 aaPredicted RBP1.88□□□□□ -2.11
HERC3-209ENST00000504994 LINC00299Q6ZSB3 139 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 C2orf88Q9BSF0 95 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 TAS2R8Q9NYW2 309 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 MYH9P35579 1960 aaKnown RBP1.88□□□□□ -2.11
HERC3-209ENST00000504994 ADGRB1O14514 1584 aa1.88□□□□□ -2.11
HERC3-209ENST00000504994 TMEM2Q9UHN6 1383 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 HIVEP2P31629 2446 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 IGLV3-32A0A0A0MS00 114 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 LOC100130705A0A1B0GUX0 176 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 TMEM30CPA0ZSE6 113 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 J3QLW9 94 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 CCDC167Q9P0B6 97 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 SORL1Q92673 2214 aa1.87□□□□□ -2.11
HERC3-209ENST00000504994 PHRF1Q9P1Y6 1649 aaKnown RBP1.87□□□□□ -2.11
HERC3-209ENST00000504994 PLXNA2O75051 1894 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 TRAV17A0A0B4J275 112 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 PDE6GP18545 87 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 GUCA1AP43080 201 aaPredicted RBP1.86□□□□□ -2.11
HERC3-209ENST00000504994 OCIAD2Q56VL3 154 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 SCIMPQ6UWF3 145 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 KCNRGQ8N5I3 272 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 DYNLRB2Q8TF09 96 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 LINC00526Q96FQ7 95 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 PSMG3Q9BT73 122 aaPredicted RBP1.86□□□□□ -2.11
HERC3-209ENST00000504994 CTTNBP2Q8WZ74 1663 aa1.86□□□□□ -2.11
HERC3-209ENST00000504994 AKAP11Q9UKA4 1901 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 TET1Q8NFU7 2136 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 MYOM3Q5VTT5 1437 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 SPEF2Q9C093 1822 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 FAM92AA1XBS5 289 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 NUPR2A6NF83 97 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 TFF1P04155 84 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 IL9P15248 144 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 IQCJQ1A5X6 159 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 DEFB119Q8N690 84 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 C10orf105Q8TEF2 133 aa1.85□□□□□ -2.11
HERC3-209ENST00000504994 MRPL36Q9P0J6 103 aaKnown RBP1.85□□□□□ -2.11
HERC3-209ENST00000504994 TRAV12-2A0A075B6T6 113 aa1.84□□□□□ -2.11
HERC3-209ENST00000504994 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
HERC3-209ENST00000504994 POLR2JP52435 117 aaKnown RBP1.84□□□□□ -2.11
HERC3-209ENST00000504994 MEIG1Q5JSS6 88 aa1.84□□□□□ -2.11
HERC3-209ENST00000504994 VSTM2AQ8TAG5 236 aa1.84□□□□□ -2.11
HERC3-209ENST00000504994 NCOA6Q14686 2063 aaPredicted RBP1.84□□□□□ -2.12
HERC3-209ENST00000504994 PRB1P04280 392 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 GYPBP06028 91 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 SLC25A6P12236 298 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 HIST1H1DP16402 221 aaKnown RBP1.83□□□□□ -2.12
HERC3-209ENST00000504994 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 SPATA45Q537H7 98 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 LINC01545Q5VT33 79 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 UNQ5815/PRO19632Q6UWF5 114 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 PLPP5Q8NEB5 264 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 ODF3Q96PU9 254 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 MED13Q9UHV7 2174 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 NALCNQ8IZF0 1738 aa1.83□□□□□ -2.12
HERC3-209ENST00000504994 MBD5Q9P267 1494 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms