RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 OR4C13Q8NGP0 309 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 C11orf45Q8TAV5 145 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 TNFRSF14Q92956 283 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 ZNF414Q96IQ9 312 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 LINC00479Q96M42 142 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 HES7Q9BYE0 225 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 Q9H3A6 140 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 RABAC1Q9UI14 185 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 HIGD1AQ9Y241 93 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 TIMM8BQ9Y5J9 83 aaPredicted RBP3.15□□□□□ -1.91
RFC1-208ENST00000504849 LINC00312Q9Y6C7 94 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 IGHV1-18A0A0C4DH31 117 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 H3BUT2 72 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 LHBP01229 141 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 PRB1P04280 392 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 HLA-DRB4P13762 266 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 GLRXP35754 106 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 LGALS7P47929 136 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 TNFAIP6P98066 277 aaPredicted RBP3.14□□□□□ -1.91
RFC1-208ENST00000504849 GUSBP1Q15486 140 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 UTF1Q5T230 341 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 LINC00336Q6ZUF6 198 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 C2orf91Q6ZV80 131 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 NEGR1Q7Z3B1 354 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 SMIM29Q86T20 159 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 UBALD2Q8IYN6 164 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 ORMDL3Q8N138 153 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 OR8A1Q8NGG7 326 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 PIFOQ8TCI5 191 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 SRSF12Q8WXF0 261 aaKnown RBP3.14□□□□□ -1.91
RFC1-208ENST00000504849 LEAP2Q969E1 77 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 GAFA1Q96PS6 74 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 MRPL20Q9BYC9 149 aaKnown RBP3.14□□□□□ -1.91
RFC1-208ENST00000504849 SLC25A39Q9BZJ4 359 aaPredicted RBP3.14□□□□□ -1.91
RFC1-208ENST00000504849 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 SMPXQ9UHP9 88 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 HLA-DRB4X5D2U9 266 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 NAV3Q8IVL0 2385 aa3.14□□□□□ -1.91
RFC1-208ENST00000504849 ATG2BQ96BY7 2078 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 PCNX1Q96RV3 2341 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 IGKV1D-37A0A075B6S9 117 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 TMEM189A5PLL7 270 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 M0R1B8 84 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 FSTL3O95633 263 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 IGKV1-16P04430 117 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 ZNF883P0CG24 379 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 FGF6P10767 208 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 RPL27AP46776 148 aaKnown RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 NMUP48645 174 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 LINC01547P58512 204 aaPredicted RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 LYZP61626 148 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 CACNG7P62955 275 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 TAL2Q16559 108 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 KLF17Q5JT82 389 aaPredicted RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 TEX36Q5VZQ5 186 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 C11orf71Q6IPW1 123 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 ZNF493Q6ZR52 646 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 LINC00173Q6ZV60 143 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 GOLT1AQ6ZVE7 132 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 LINC00311Q8N616 119 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 OR10W1Q8NGF6 305 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 IFI27L1Q96BM0 104 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 PRELID3AQ96N28 172 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 RASL11BQ9BPW5 248 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 MAP1LC3AQ9H492 121 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 RETNQ9HD89 108 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 PSG8Q9UQ74 426 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 PYGO1Q9Y3Y4 419 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 U3KQK5 164 aa3.13□□□□□ -1.91
RFC1-208ENST00000504849 CHD3Q12873 2000 aaKnown RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 TDRD6O60522 2096 aaKnown RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 NCOA6Q14686 2063 aaPredicted RBP3.13□□□□□ -1.91
RFC1-208ENST00000504849 KIAA1549Q9HCM3 1950 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 NBPF19A0A087WUL8 3843 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 IGLV3-9A0A075B6K5 115 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 TRAV17A0A0B4J275 112 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 D6R8Y8 96 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 F8W1H4 67 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 NDUFB3O43676 98 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 ARMS2P0C7Q2 107 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 CKS2P33552 79 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 ZNF138P52744 262 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 WT1-ASQ06250 92 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 PDE6HQ13956 83 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 C5orf64Q2M2E5 130 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 NSUN5P1Q3KNT7 163 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 FAM104BQ5XKR9 115 aa3.12□□□□□ -1.91
RFC1-208ENST00000504849 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms