RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 NDFIP1Q9BT67 221 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 CYTL1Q9NRR1 136 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 NAGKQ9UJ70 344 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
HOXC6-203ENST00000504315 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 K7EQM0 130 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 ARPC5O15511 151 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 GNRH2O43555 120 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
HOXC6-203ENST00000504315 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 SGK494Q96LW2 274 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 HERC2O95714 4834 aa9.41□□□□□ -0.9
HOXC6-203ENST00000504315 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
HOXC6-203ENST00000504315 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 M0R2P5 195 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 SFTA3P0C7M3 94 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.9
HOXC6-203ENST00000504315 FLI1Q01543 452 aaPredicted RBP9.4□□□□□ -0.9
HOXC6-203ENST00000504315 TNP2Q05952 138 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 ZNF345Q14585 488 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 ZNF479Q96JC4 524 aa9.4□□□□□ -0.9
HOXC6-203ENST00000504315 TRGV4A0A0C4DH28 118 aa9.39□□□□□ -0.91
HOXC6-203ENST00000504315 PFN1P07737 140 aaKnown RBP9.39□□□□□ -0.91
HOXC6-203ENST00000504315 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
HOXC6-203ENST00000504315 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
HOXC6-203ENST00000504315 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
HOXC6-203ENST00000504315 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 GCGP01275 180 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 SAPCD1Q5SSQ6 148 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
HOXC6-203ENST00000504315 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
HOXC6-203ENST00000504315 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 SMLR1H3BR10 107 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 K7EQD1 137 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 ORM1P02763 201 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 ZFP69Q49AA0 526 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 PRNTQ86SH4 94 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 KCNRGQ8N5I3 272 aa9.37□□□□□ -0.91
HOXC6-203ENST00000504315 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 PEX7O00628 323 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 SIVA1O15304 175 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
HOXC6-203ENST00000504315 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
HOXC6-203ENST00000504315 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 OR4C5Q8NGB2 326 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 OR11H4Q8NGC9 324 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 HIST1H2BAQ96A08 127 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 PTH2Q96A98 100 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 LINC00479Q96M42 142 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
HOXC6-203ENST00000504315 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 CIDEAO60543 219 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 NXPH4O95158 308 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
HOXC6-203ENST00000504315 SRIP30626 198 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 UBE2G2P60604 165 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 Q86TA4 180 aa9.35□□□□□ -0.91
HOXC6-203ENST00000504315 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 A0A0D9SG52 128 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 C9JCJ5 164 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 IFNA7P01567 189 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 SEC11BP0C7V7 166 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 GYPEP15421 78 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 FHITP49789 147 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 PPT1P50897 306 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
HOXC6-203ENST00000504315 ZNF575Q86XF7 245 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 PCNPQ8WW12 178 aaKnown RBP9.34□□□□□ -0.91
HOXC6-203ENST00000504315 TXNDC17Q9BRA2 123 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
HOXC6-203ENST00000504315 RS1O15537 224 aa9.33□□□□□ -0.92
HOXC6-203ENST00000504315 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
HOXC6-203ENST00000504315 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
HOXC6-203ENST00000504315 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
HOXC6-203ENST00000504315 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 FABP5P3A8MUU1 101 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 UMAD1C9J7I0 102 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 K7EP13 123 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 BCL2L11O43521 198 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 TIRAPP58753 221 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 LINC00315P59091 139 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 SH2D6Q7Z4S9 175 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 STOML3Q8TAV4 291 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 MBD3L1Q8WWY6 194 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 ZFP30Q9Y2G7 519 aa9.32□□□□□ -0.92
HOXC6-203ENST00000504315 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
HOXC6-203ENST00000504315 CRIP1P50238 77 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms