RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 TOR2AQ5JU69 321 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 FAM162BQ5T6X4 162 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
VCAN-205ENST00000503923 PCNPQ8WW12 178 aaKnown RBP7.93□□□□□ -1.14
VCAN-205ENST00000503923 FAM210AQ96ND0 272 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 DERL1Q9BUN8 251 aa7.93□□□□□ -1.14
VCAN-205ENST00000503923 CSMD3Q7Z407 3707 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 NDUFS6O75380 124 aaKnown RBP7.92□□□□□ -1.14
VCAN-205ENST00000503923 TYMSP04818 313 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 DEFB130BP0DP73 79 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 DEFB130AP0DP74 79 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 MLST8Q9BVC4 326 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 EIF5A2Q9GZV4 153 aaKnown RBP7.92□□□□□ -1.14
VCAN-205ENST00000503923 C11orf21Q9P2W6 132 aa7.92□□□□□ -1.14
VCAN-205ENST00000503923 KLK5Q9Y337 293 aaPredicted RBP7.92□□□□□ -1.14
VCAN-205ENST00000503923 DYNC2H1Q8NCM8 4307 aaKnown RBP7.91□□□□□ -1.14
VCAN-205ENST00000503923 DEFB131BA0A096LNP1 70 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 IGHV3-16A0A0C4DH30 117 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 TMEM250H0YL14 139 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 GNRH2O43555 120 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 SH2D1AO60880 128 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 GNG4P50150 75 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 CRIP1P50238 77 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 RAB14P61106 215 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 CENPWQ5EE01 88 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 SMIM12Q96EX1 92 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 SPXQ9BT56 116 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 MDFICQ9P1T7 246 aa7.91□□□□□ -1.14
VCAN-205ENST00000503923 TRGV1A0A0A0MS02 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 GAGE12BA1L429 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 RAB19A4D1S5 217 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 SPINK4O60575 86 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 GAGE7O76087 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 ORM1P02763 201 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 GAGE12FP0CL80 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 GAGE12GP0CL81 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 GAGE12IP0CL82 117 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 LGALS9BQ3B8N2 356 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 Q6ZTI0 123 aa7.9□□□□□ -1.14
VCAN-205ENST00000503923 B4DEV8 164 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 C9JCJ5 164 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 HTN3P15516 51 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 PLECQ15149 4684 aaKnown RBP7.89□□□□□ -1.15
VCAN-205ENST00000503923 LINC01559Q495D7 138 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 PARLQ9H300 379 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 BIN3Q9NQY0 253 aa7.89□□□□□ -1.15
VCAN-205ENST00000503923 TRBV20OR9-2A0A075B6H5 130 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 TRGV2A0A075B6R0 118 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 KRBOX1C9JBD0 128 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 M0R036 132 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 IGLV2-8P01709 118 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 ATP5G1P05496 136 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 SRP19P09132 144 aaKnown RBP7.88□□□□□ -1.15
VCAN-205ENST00000503923 MGST1P10620 155 aaKnown RBP7.88□□□□□ -1.15
VCAN-205ENST00000503923 S100A4P26447 101 aaKnown RBP7.88□□□□□ -1.15
VCAN-205ENST00000503923 ASIPP42127 132 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 CEBPGP53567 150 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 PEA15Q15121 130 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 C18orf15Q96N68 181 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 SMDT1Q9H4I9 107 aa7.88□□□□□ -1.15
VCAN-205ENST00000503923 MRPL16Q9NX20 251 aaKnown RBP7.88□□□□□ -1.15
VCAN-205ENST00000503923 IGLL5B9A064 214 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 M0R2P5 195 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
VCAN-205ENST00000503923 TCTAP57738 103 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 IFITM2Q01629 132 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 OR5I1Q13606 314 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 DNLZQ5SXM8 178 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 RASL10AQ92737 203 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
VCAN-205ENST00000503923 FAM210BQ96KR6 192 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 C9orf85Q96MD7 179 aa7.87□□□□□ -1.15
VCAN-205ENST00000503923 TMSB15BA0A087X1C1 80 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 PGPEP1LA6NFU8 196 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 F5H768 121 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 PTH2Q96A98 100 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 SMIM7Q9BQ49 75 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 IL36BQ9NZH7 164 aa7.86□□□□□ -1.15
VCAN-205ENST00000503923 TENM2Q9NT68 2774 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 IGHV4-4A0A075B6R2 117 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 GRIFINA4D1Z8 144 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 C19orf71A6NCJ1 209 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 ZNF727A8MUV8 499 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 H3BVH4 76 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 CXCL1P09341 107 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 OCC1Q8TAD7 63 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 NDUFAF3Q9BU61 184 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 LY96Q9Y6Y9 160 aa7.85□□□□□ -1.15
VCAN-205ENST00000503923 P01737 135 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
VCAN-205ENST00000503923 RPL19P84098 196 aaKnown RBP7.84□□□□□ -1.15
VCAN-205ENST00000503923 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
VCAN-205ENST00000503923 ZNF876PQ49A33 203 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms