RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
RNF4-204ENST00000503659 CTXND1A0A1B0GTU2 59 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 PAX4O43316 350 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
RNF4-204ENST00000503659 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
RNF4-204ENST00000503659 SFTA3P0C7M3 94 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 TNP2Q05952 138 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 NDFIP1Q9BT67 221 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 HHLA3Q9XRX5 114 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
RNF4-204ENST00000503659 A0A1W2PRE2 83 aa12.57□□□□□ -0.4
RNF4-204ENST00000503659 TAAR5O14804 337 aa12.57□□□□□ -0.4
RNF4-204ENST00000503659 CYB561D1Q8N8Q1 229 aa12.57□□□□□ -0.4
RNF4-204ENST00000503659 TMEM75Q8N9X5 138 aa12.57□□□□□ -0.4
RNF4-204ENST00000503659 K7EQM0 130 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 M0R2P5 195 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
RNF4-204ENST00000503659 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
RNF4-204ENST00000503659 SLAQ13239 276 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 TTC32Q5I0X7 151 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 AKR1C8PQ5T2L2 129 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 KCNS1Q96KK3 526 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 SDF2L1Q9HCN8 221 aa12.56□□□□□ -0.4
RNF4-204ENST00000503659 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
RNF4-204ENST00000503659 GCGP01275 180 aa12.55□□□□□ -0.4
RNF4-204ENST00000503659 PRNTQ86SH4 94 aa12.55□□□□□ -0.4
RNF4-204ENST00000503659 LINC00479Q96M42 142 aa12.55□□□□□ -0.4
RNF4-204ENST00000503659 PCLOQ9Y6V0 5065 aa12.54□□□□□ -0.4
RNF4-204ENST00000503659 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
RNF4-204ENST00000503659 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
RNF4-204ENST00000503659 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
RNF4-204ENST00000503659 BTF3P20290 206 aaKnown RBP12.54□□□□□ -0.4
RNF4-204ENST00000503659 UBE2G2P60604 165 aa12.54□□□□□ -0.4
RNF4-204ENST00000503659 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 FBLL1A6NHQ2 334 aaKnown RBP12.53□□□□□ -0.4
RNF4-204ENST00000503659 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 ZNF345Q14585 488 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 ZNF575Q86XF7 245 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 KCNRGQ8N5I3 272 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 OR11H4Q8NGC9 324 aa12.53□□□□□ -0.4
RNF4-204ENST00000503659 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.41
RNF4-204ENST00000503659 K7EQD1 137 aa12.52□□□□□ -0.41
RNF4-204ENST00000503659 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
RNF4-204ENST00000503659 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
RNF4-204ENST00000503659 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.41
RNF4-204ENST00000503659 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.41
RNF4-204ENST00000503659 PEX7O00628 323 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 NXPH4O95158 308 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 LYPD5Q6UWN5 251 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 Q86TA4 180 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 C9orf85Q96MD7 179 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 ARL2-SNX15V9GYD0 113 aa12.51□□□□□ -0.41
RNF4-204ENST00000503659 SIVA1O15304 175 aa12.5□□□□□ -0.41
RNF4-204ENST00000503659 IFNA7P01567 189 aa12.5□□□□□ -0.41
RNF4-204ENST00000503659 GYPEP15421 78 aa12.5□□□□□ -0.41
RNF4-204ENST00000503659 FHITP49789 147 aa12.5□□□□□ -0.41
RNF4-204ENST00000503659 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
RNF4-204ENST00000503659 HMSDA8MTL9 139 aa12.49□□□□□ -0.41
RNF4-204ENST00000503659 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
RNF4-204ENST00000503659 SRIP30626 198 aa12.49□□□□□ -0.41
RNF4-204ENST00000503659 DPPA3Q6W0C5 159 aa12.49□□□□□ -0.41
RNF4-204ENST00000503659 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
RNF4-204ENST00000503659 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
RNF4-204ENST00000503659 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 C9JCJ5 164 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 ORM1P02763 201 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
RNF4-204ENST00000503659 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
RNF4-204ENST00000503659 PPT1P50897 306 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 LINC00315P59091 139 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 ZNF876PQ49A33 203 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 PCNPQ8WW12 178 aaKnown RBP12.48□□□□□ -0.41
RNF4-204ENST00000503659 HIST1H2BAQ96A08 127 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 RYR1P21817 5038 aa12.48□□□□□ -0.41
RNF4-204ENST00000503659 CFAP126Q5VTH2 177 aa12.47□□□□□ -0.41
RNF4-204ENST00000503659 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 RS1O15537 224 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 BCL2L11O43521 198 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 SEC11BP0C7V7 166 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 ZNF506Q5JVG8 444 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 Q6ZRN7 208 aaPredicted RBP12.46□□□□□ -0.41
RNF4-204ENST00000503659 PTH2Q96A98 100 aa12.46□□□□□ -0.41
RNF4-204ENST00000503659 HSPG2P98160 4391 aa12.46□□□□□ -0.42
RNF4-204ENST00000503659 A0A0D9SG52 128 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 CRIP1P50238 77 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 COX8CQ7Z4L0 72 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 ZC2HC1AQ96GY0 325 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 TXNDC17Q9BRA2 123 aa12.45□□□□□ -0.42
RNF4-204ENST00000503659 DNAH5Q8TE73 4624 aa12.44□□□□□ -0.42
RNF4-204ENST00000503659 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms