RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 GCHFRP30047 84 aa13.31□□□□□ -0.28
UBE2D3-215ENST00000503418 SRIP30626 198 aa13.31□□□□□ -0.28
UBE2D3-215ENST00000503418 Q5BKY6 102 aa13.31□□□□□ -0.28
UBE2D3-215ENST00000503418 IQCF2Q8IXL9 164 aa13.31□□□□□ -0.28
UBE2D3-215ENST00000503418 SH3BGRL3Q9H299 93 aa13.31□□□□□ -0.28
UBE2D3-215ENST00000503418 MBP02144 154 aa13.3□□□□□ -0.28
UBE2D3-215ENST00000503418 GYPEP15421 78 aa13.3□□□□□ -0.28
UBE2D3-215ENST00000503418 SERF2P84101 59 aa13.3□□□□□ -0.28
UBE2D3-215ENST00000503418 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
UBE2D3-215ENST00000503418 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
UBE2D3-215ENST00000503418 SERTM2A0A1B0GWG4 89 aa13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 K7EQM0 130 aa13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 TCRAP04437 139 aa13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 GIPP09681 153 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 INO80EQ8NBZ0 244 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 ASB13Q8WXK3 278 aa13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 KCNS1Q96KK3 526 aa13.29□□□□□ -0.28
UBE2D3-215ENST00000503418 FXYD6-FXYD2A0A087WZ82 144 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 CXorf1O96002 111 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 ORM1P02763 201 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 SUMO1P63165 101 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 SUN5Q8TC36 379 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 ACTR3CQ9C0K3 210 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 HSPG2P98160 4391 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
UBE2D3-215ENST00000503418 C9JCJ5 164 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 CDK2AP2O75956 126 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 KRTAP10-2P60368 255 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 TXNDC17Q9BRA2 123 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 PSG8Q9UQ74 426 aa13.27□□□□□ -0.29
UBE2D3-215ENST00000503418 GGTLC3B5MD39 225 aa13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 GCGP01275 180 aa13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 ZNF80P51504 273 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 RPL7L1Q6DKI1 246 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 Q6ZRN7 208 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 PRNTQ86SH4 94 aa13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 TNFSF18Q9UNG2 199 aa13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 LY96Q9Y6Y9 160 aa13.26□□□□□ -0.29
UBE2D3-215ENST00000503418 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 LOC100131303A0A0U1RQF7 123 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 RNF222A6NCQ9 220 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 FLI1Q01543 452 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 ZFP69Q49AA0 526 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 WFDC10BQ8IUB3 73 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 TNFRSF18Q9Y5U5 241 aa13.25□□□□□ -0.29
UBE2D3-215ENST00000503418 TRAV9-2A0A087WT02 112 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 TAAR5O14804 337 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 CYB561D1Q8N8Q1 229 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 TMEM75Q8N9X5 138 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 KRTAP4-5Q9BYR2 181 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
UBE2D3-215ENST00000503418 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 ZNF876PQ49A33 203 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 SMUG1Q53HV7 270 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 OR2T35Q8NGX2 323 aa13.23□□□□□ -0.29
UBE2D3-215ENST00000503418 FBLL1A6NHQ2 334 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-215ENST00000503418 GATA1P15976 413 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-215ENST00000503418 NFE4Q86UQ8 179 aa13.22□□□□□ -0.29
UBE2D3-215ENST00000503418 CTXND1A0A1B0GTU2 59 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 EREGO14944 169 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 EVI2AP22794 236 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 UBE2G2P60604 165 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 ERVFC1-1P60608 527 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
UBE2D3-215ENST00000503418 ABCA13Q86UQ4 5058 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 IFNA7P01567 189 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 PPT1P50897 306 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 SAPCD1Q5SSQ6 148 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 DPPA3Q6W0C5 159 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 SH2D6Q7Z4S9 175 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
UBE2D3-215ENST00000503418 DNAH10OSP0CZ25 163 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 FGF8P55075 233 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 CFAP126Q5VTH2 177 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 SLC25A29Q8N8R3 303 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 C9orf85Q96MD7 179 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
UBE2D3-215ENST00000503418 PGPEP1LA6NFU8 196 aa13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 RS1O15537 224 aa13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 FUSP35637 526 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 ZNF506Q5JVG8 444 aa13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 PRADC1Q9BSG0 188 aa13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 ARL2-SNX15V9GYD0 113 aa13.18□□□□□ -0.3
UBE2D3-215ENST00000503418 K7EP13 123 aa13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 PEX7O00628 323 aa13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 CRYGDP07320 174 aa13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 RNASE3P12724 160 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 RGS21Q2M5E4 152 aa13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 DNAH5Q8TE73 4624 aa13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-215ENST00000503418 G3V3Q6 166 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms