RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 CRIP1P50238 77 aa12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 SDF2L1Q9HCN8 221 aa12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 KMT2CQ8NEZ4 4911 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-216ENST00000502557 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 GAGE7O76087 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 HTN3P15516 51 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 Q6ZTI0 123 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 NHLRC2Q8NBF2 726 aa12.62□□□□□ -0.39
CCHCR1-216ENST00000502557 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 SPINK4O60575 86 aa12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 SH2D1AO60880 128 aa12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 PCNPQ8WW12 178 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
CCHCR1-216ENST00000502557 STARD9Q9P2P6 4700 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 IGLL5B9A064 214 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
CCHCR1-216ENST00000502557 ATP5G1P05496 136 aa12.59□□□□□ -0.39
CCHCR1-216ENST00000502557 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CCHCR1-216ENST00000502557 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-216ENST00000502557 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
CCHCR1-216ENST00000502557 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
CCHCR1-216ENST00000502557 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
CCHCR1-216ENST00000502557 TOR2AQ5JU69 321 aa12.58□□□□□ -0.4
CCHCR1-216ENST00000502557 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 ORM1P02763 201 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 APLNQ9ULZ1 77 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 RYR3Q15413 4870 aa12.57□□□□□ -0.4
CCHCR1-216ENST00000502557 DYNC2H1Q8NCM8 4307 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 B4DEV8 164 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 F5H768 121 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
CCHCR1-216ENST00000502557 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 M0R036 132 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 M0R2P5 195 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 GNG4P50150 75 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 TCTAP57738 103 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 RASL10AQ92737 203 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 FAM210BQ96KR6 192 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-216ENST00000502557 PRR27Q6MZM9 219 aa12.54□□□□□ -0.4
CCHCR1-216ENST00000502557 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
CCHCR1-216ENST00000502557 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
CCHCR1-216ENST00000502557 LCE6AA0A183 80 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 NDUFS6O75380 124 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 HOXA5P20719 270 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 ASIPP42127 132 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 PARLQ9H300 379 aa12.53□□□□□ -0.4
CCHCR1-216ENST00000502557 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 DNLZQ5SXM8 178 aa12.52□□□□□ -0.41
CCHCR1-216ENST00000502557 C9JCJ5 164 aa12.51□□□□□ -0.41
CCHCR1-216ENST00000502557 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-216ENST00000502557 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-216ENST00000502557 OR5I1Q13606 314 aa12.51□□□□□ -0.41
CCHCR1-216ENST00000502557 PTH2Q96A98 100 aa12.51□□□□□ -0.41
CCHCR1-216ENST00000502557 H3BVH4 76 aa12.5□□□□□ -0.41
CCHCR1-216ENST00000502557 CEBPGP53567 150 aa12.5□□□□□ -0.41
CCHCR1-216ENST00000502557 POM121L12Q8N7R1 296 aa12.5□□□□□ -0.41
CCHCR1-216ENST00000502557 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
CCHCR1-216ENST00000502557 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
CCHCR1-216ENST00000502557 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
CCHCR1-216ENST00000502557 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
CCHCR1-216ENST00000502557 IFITM2Q01629 132 aa12.49□□□□□ -0.41
CCHCR1-216ENST00000502557 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
CCHCR1-216ENST00000502557 ZNF479Q96JC4 524 aa12.49□□□□□ -0.41
CCHCR1-216ENST00000502557 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
CCHCR1-216ENST00000502557 TRAV4A0A0B4J268 109 aa12.48□□□□□ -0.41
CCHCR1-216ENST00000502557 CXCL1P09341 107 aa12.48□□□□□ -0.41
CCHCR1-216ENST00000502557 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
CCHCR1-216ENST00000502557 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms