RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 IGHV3-49A0A0A0MS15 119 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV3-74A0A0B4J1X5 117 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 TRAV34A0A0B4J273 112 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV3-66A0A0C4DH42 116 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 XKRY2A2RUG3 117 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PGPEP1LA6NFU8 196 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PRSS29PA6NIE9 313 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 LINC01619G3V211 115 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 G3V4G9 280 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 M0QZ24 198 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 SLC17A3O00476 420 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 ISLRO14498 428 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 CHEK1O14757 476 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 APOHP02749 345 aaPredicted RBP4□□□□□ -1.77
HMGXB4-208ENST00000498325 LINC00614P0C842 121 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 ID1P41134 155 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PAFAH1B2P68402 229 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PSG3Q16557 428 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 ACTL10Q5JWF8 245 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 IBA57Q5T440 356 aaKnown RBP4□□□□□ -1.77
HMGXB4-208ENST00000498325 GFI1BQ5VTD9 330 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 LCN12Q6JVE5 192 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 UNQ9165/PRO28630Q6UXU0 137 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 FAM231DQ6ZW35 169 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 OR1N2Q8NGR9 330 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 C4orf3Q8WVX3 66 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 GLMPQ8WWB7 406 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 LINC00479Q96M42 142 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PRO1933Q9H354 126 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 PSG8Q9UQ74 426 aa4□□□□□ -1.77
HMGXB4-208ENST00000498325 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 IGHV4OR15-8A0A075B7B6 117 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 A0A087WW49 117 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 KIR2DL5BA0A0G2JN68 375 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 KIR2DL5BA0A0G2JPC4 375 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 A0A1B0GUS0 222 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 RBAKDNA6NC62 111 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 K7EN84 100 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 M0R3E3 92 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 LTAP01374 205 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 IGLV2-8P01709 118 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 HOXD3P31249 432 aaPredicted RBP3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 SYNJ2BPP57105 145 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 OR5I1Q13606 314 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 KLF5Q13887 457 aaPredicted RBP3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 COX19Q49B96 90 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 TCF24Q7RTU0 167 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 PRNTQ86SH4 94 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 KIR2DL5AQ8N109 375 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 GBGT1Q8N5D6 347 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 KLHL30-AS1Q8NEE0 82 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 OR11H1Q8NG94 326 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 LINC01006Q8NI28 216 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 MRAPQ8TCY5 172 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 C20orf144Q9BQM9 153 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 NDFIP1Q9BT67 221 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 NRN1Q9NPD7 142 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF492Q9P255 531 aa3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 TSSC4Q9Y5U2 329 aaPredicted RBP3.99□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF705GA8MUZ8 300 aaPredicted RBP3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 OVOL1O14753 267 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 P01737 135 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 ESDP10768 282 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 CBLN1P23435 193 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 KPRPQ5T749 579 aaPredicted RBP3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 TMEM78Q5T7P6 136 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 PRR27Q6MZM9 219 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 Q86TA4 180 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 NHLRC2Q8NBF2 726 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 OR4B1Q8NGF8 309 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 WIPF2Q8TF74 440 aaPredicted RBP3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 SGK494Q96LW2 274 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 RNASE7Q9H1E1 156 aaKnown RBP3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 NAGKQ9UJ70 344 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 V9GYV3 84 aa3.98□□□□□ -1.77
HMGXB4-208ENST00000498325 TRAV8-1A0A0A6YYK1 113 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 TRAV8-2A0A0B4J237 113 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 A0A1W2PPQ1 181 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 TMEM213A2RRL7 107 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 C2orf70A6NJV1 201 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF705FA8MVS1 300 aaPredicted RBP3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 A8MWL6 223 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 DLEU1O43261 78 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 IGLV2-11P01706 119 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 CD28P10747 220 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 HLA-DMBP28068 263 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF138P52744 262 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 TCTEX1D4Q5JR98 221 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 COX8CQ7Z4L0 72 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 RNF182Q8N6D2 247 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 ZNF738Q8NE65 137 aa3.97□□□□□ -1.77
HMGXB4-208ENST00000498325 LINC00477Q96M19 166 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms